RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TTLL4Q14679 1199 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 ARHGAP18Q8N392 663 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 CENPKQ9BS16 269 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 CARSP49589 748 aaKnown RBP13.39□□□□□ -0.27
SPG11-203ENST00000535302 FOXO4P98177 505 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 CCDC144BQ3MJ40 725 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 RERGLQ9H628 205 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 RUBCNLQ9H714 662 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 GGCXP38435 758 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 FASTKD1Q53R41 847 aaKnown RBP13.39□□□□□ -0.27
SPG11-203ENST00000535302 USP33Q8TEY7 942 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 TMEM143Q96AN5 459 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 ADNPQ9H2P0 1102 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.39□□□□□ -0.27
SPG11-203ENST00000535302 ZNF229Q9UJW7 825 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 TTC37Q6PGP7 1564 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 MEFVO15553 781 aaPredicted RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 MAN1A2O60476 641 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 GPS1Q13098 491 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 FAM84BQ96KN1 310 aaPredicted RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 CHCHD3Q9NX63 227 aaKnown RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 ZFP69BQ9UJL9 534 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 SPATA31E1Q6ZUB1 1445 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 SUPT3HB4E1H0 165 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 QARSP47897 775 aaKnown RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 NAA30Q147X3 362 aaPredicted RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 NBPF20Q3BBV1 942 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 FAM102AQ5T9C2 384 aaPredicted RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 NBPF10Q6P3W6 841 aaKnown RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 ST13P4Q8IZP2 240 aaPredicted RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 URGCPQ8TCY9 931 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 CCHCR1Q8TD31 782 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 RMDN1Q96DB5 314 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 FAM161BQ96MY7 647 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 TRAF3IP3Q9Y228 551 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 EMSYQ7Z589 1322 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 LGALS16A8MUM7 142 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 RPS6P62753 249 aaKnown RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 ALCAMQ13740 583 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 CLEC4GQ6UXB4 293 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 RHOT2Q8IXI1 618 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 VMP1Q96GC9 406 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 CACNA2D2Q9NY47 1150 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 ORC4O43929 436 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 SERPINI2O75830 405 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 KPNA2P52292 529 aaKnown RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 TMEM35BQ8NCS4 154 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 SLC30A5Q8TAD4 765 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 FAM118BQ9BPY3 351 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 BARHL2Q9NY43 387 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 GNAT1P11488 350 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 AARSP49588 968 aaKnown RBP eCLIP13.38□□□□□ -0.27
SPG11-203ENST00000535302 ARL4CP56559 192 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 TNFAIP2Q03169 654 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 NFIXQ14938 502 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 RRM2BQ7LG56 351 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 DHX40Q8IX18 779 aaKnown RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 ZBED8Q8IZ13 594 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 INPP5DQ92835 1189 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 TOPORSQ9NS56 1045 aaPredicted RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 TMEM161AQ9NX61 479 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 RBAKQ9NYW8 714 aaPredicted RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 ADGRA2Q96PE1 1338 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 RGS7P49802 495 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 TRIM60Q495X7 471 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 SLC10A5Q5PT55 438 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 TSC22D3Q99576 134 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 UNC45AQ9H3U1 944 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 APOBEC2Q9Y235 224 aaKnown RBP13.38□□□□□ -0.27
SPG11-203ENST00000535302 SNX5Q9Y5X3 404 aa13.38□□□□□ -0.27
SPG11-203ENST00000535302 ALDH18A1P54886 795 aaKnown RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 SRBD1Q8N5C6 995 aaKnown RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 SRPK1Q96SB4 655 aaKnown RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 CDK12Q9NYV4 1490 aaPredicted RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 CYP26A1O43174 497 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 P4HBP07237 508 aaKnown RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 OCA2Q04671 838 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 DNAJC7Q99615 494 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 HSPA8P11142 646 aaKnown RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 PDIA2Q13087 525 aaKnown RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 ACAD11Q709F0 780 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 RNF149Q8NC42 400 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 DHX38Q92620 1227 aaKnown RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 SPDYE5A6NIY4 337 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 MORF4L2Q15014 288 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 SPDYE7PQ495Y7 208 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 SGO1Q5FBB7 561 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 BTNL9Q6UXG8 535 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 KIAA2013Q8IYS2 634 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 MYO1GB0I1T2 1018 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 KCNA2P16389 499 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 TCN1P20061 433 aaPredicted RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 SDC4P31431 198 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 ACOT2P49753 483 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 MAGOHP61326 146 aaKnown RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 MTF1Q14872 753 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms