RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ECI2O75521 394 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 HNRNPA1P09651 372 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLIP1-206ENST00000535290 CHRNB1P11230 501 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 SFPQP23246 707 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLIP1-206ENST00000535290 ZNF252P-AS1Q0IIN9 211 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 TANGO2Q6ICL3 276 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 CATSPER4Q7RTX7 472 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 PLA2G4DQ86XP0 818 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 CTCFLQ8NI51 663 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-206ENST00000535290 IGDCC4Q8TDY8 1250 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 FAM3CQ92520 227 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 MCRS1Q96EZ8 462 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 KIF12Q96FN5 646 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 IER2Q9BTL4 223 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 SCNM1Q9BWG6 230 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 ANO3Q9BYT9 981 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLIP1-206ENST00000535290 RYDENQ9NUL5 291 aaKnown RBP9.34□□□□□ -0.91
CLIP1-206ENST00000535290 HCFC1R1Q9NWW0 138 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 C2orf42Q9NWW7 574 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 FBXW11Q9UKB1 542 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 PCDHA10Q9Y5I2 948 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 TAF6LQ9Y6J9 622 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 RALGAPA1Q6GYQ0 2036 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 NRG2O14511 850 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-206ENST00000535290 MAP3K13O43283 966 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 OATP04181 439 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 C8AP07357 584 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 PSAPP07602 524 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 ZNF76P36508 570 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 RBM25P49756 843 aaKnown RBP9.33□□□□□ -0.92
CLIP1-206ENST00000535290 ANTXR2P58335 489 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 DSC1Q08554 894 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 TRDNQ13061 729 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 GRM2Q14416 872 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 PLA2G2CQ5R387 149 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 PPM1LQ5SGD2 360 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 UBXN11Q5T124 520 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 TCEAL6Q6IPX3 200 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 ZNF746Q6NUN9 644 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-206ENST00000535290 FUT10Q6P4F1 479 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 PRSS55Q6UWB4 352 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-206ENST00000535290 NIPA1Q7RTP0 329 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 HEATR3Q7Z4Q2 680 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 KSR1Q8IVT5 923 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 ZNF654Q8IZM8 581 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 SPEM1Q8N4L4 309 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 CCDC82Q8N4S0 544 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 RABGGTAQ92696 567 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 DNASE1L2Q92874 299 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 TCEAL3Q969E4 200 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 FAM167AQ96KS9 214 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 MAP3K14Q99558 947 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 LZTS2Q9BRK4 669 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 IL25Q9H293 177 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 NRBP2Q9NSY0 501 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 MIOSQ9NXC5 875 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 DNMT3BQ9UBC3 853 aaKnown RBP9.33□□□□□ -0.92
CLIP1-206ENST00000535290 STK24Q9Y6E0 443 aa9.33□□□□□ -0.92
CLIP1-206ENST00000535290 AKAP13Q12802 2813 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 IGLV3-22A0A075B6J6 115 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 CYSRT1A8MQ03 144 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 ADAM12O43184 909 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 RXRAP19793 462 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 HOXA11P31270 313 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-206ENST00000535290 SREBF1P36956 1147 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 PRKCEQ02156 737 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 TARBP2Q15633 366 aaKnown RBP9.32□□□□□ -0.92
CLIP1-206ENST00000535290 UGCGQ16739 394 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 SLC5A9Q2M3M2 681 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 USP41Q3LFD5 358 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 PABPC1LQ4VXU2 614 aaKnown RBP9.32□□□□□ -0.92
CLIP1-206ENST00000535290 RTP2Q5QGT7 225 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 LIN9Q5TKA1 542 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 RNF43Q68DV7 783 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 SMAP1Q8IYB5 467 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-206ENST00000535290 GPR65Q8IYL9 337 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 MS4A3Q96HJ5 214 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 GAD1Q99259 594 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 CLSTN3Q9BQT9 956 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 SH2D3AQ9BRG2 576 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 ZNF577Q9BSK1 485 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 BRD9Q9H8M2 597 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 DIAPH3Q9NSV4 1193 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 RBM12Q9NTZ6 932 aaKnown RBP9.32□□□□□ -0.92
CLIP1-206ENST00000535290 AGPAT5Q9NUQ2 364 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 KCNH3Q9ULD8 1083 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 MRPS23Q9Y3D9 190 aaKnown RBP9.32□□□□□ -0.92
CLIP1-206ENST00000535290 PIAS3Q9Y6X2 628 aa9.32□□□□□ -0.92
CLIP1-206ENST00000535290 SMG1Q96Q15 3661 aaKnown RBP9.32□□□□□ -0.92
CLIP1-206ENST00000535290 CNTNAP2Q9UHC6 1331 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 CACNA1EQ15878 2313 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 IGSF10Q6WRI0 2623 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 IGKV6-21A0A0C4DH24 114 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 TMEM150BA6NC51 233 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 ARL5CA6NH57 179 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 C4orf47A7E2U8 309 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 XYLBO75191 536 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 DDAH1O94760 285 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms