RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 HSD17B4P51659 736 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 CDH6P55285 790 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 HAUS6Q7Z4H7 955 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 EMSYQ7Z589 1322 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.25■□□□□ 0.676e-7■□□□□ 10.6
SFSWAP-203ENST00000535236 TTC37Q6PGP7 1564 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 APOL1O14791 398 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 CHRNA3P32297 505 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 DDX53Q86TM3 631 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 PLEKHA5Q9HAU0 1116 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 TRPC7Q9HCX4 862 aa19.25■□□□□ 0.67
SFSWAP-203ENST00000535236 ADGRL3Q9HAR2 1447 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 ZC3H4Q9UPT8 1303 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 DIAPH2O60879 1101 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 GNL1P36915 607 aaPredicted RBP19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 AKR1B1P15121 316 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 MTMR2Q13614 643 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 ALX1Q15699 326 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 FASTKD1Q53R41 847 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 ZBED8Q8IZ13 594 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 EPAS1Q99814 870 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 KCNA2P16389 499 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 DDX5P17844 614 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 YWHABP31946 246 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 ANKRD40Q6AI12 368 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 ANKS3Q6ZW76 656 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 PID1Q7Z2X4 250 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 NAF1Q96HR8 494 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 GPBP1L1Q9HC44 474 aaPredicted RBP19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 AIPL1Q9NZN9 384 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 STX18Q9P2W9 335 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 KBTBD13C9JR72 458 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 ALDH1A1P00352 501 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 TRIM49P0CI25 452 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 TRIM49CP0CI26 452 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 ATICP31939 592 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 ASAP3Q8TDY4 903 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 PCDHGB4Q9UN71 923 aa19.24■□□□□ 0.67
SFSWAP-203ENST00000535236 DDIASQ8IXT1 998 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 SNF8Q96H20 258 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 LSM7Q9UK45 103 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 SNX5Q9Y5X3 404 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 NEDD1Q8NHV4 660 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 CPSF1Q10570 1443 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 ASMTLO95671 621 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 PRR29P0C7W0 189 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 CDC42EP1Q00587 391 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 TAF1CQ15572 869 aaPredicted RBP19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 GUF1Q8N442 669 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 WARS2Q9UGM6 360 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 SULT1E1P49888 294 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 ST8SIA6P61647 398 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 ATP11CQ8NB49 1132 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 PGBD4Q96DM1 585 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 TUFT1Q9NNX1 390 aa19.23■□□□□ 0.67
SFSWAP-203ENST00000535236 ATP5HO75947 161 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 CDC27P30260 824 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 TPI1P60174 286 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 RRM2BQ7LG56 351 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.22■□□□□ 0.673e-14■□□□□ 10.7
SFSWAP-203ENST00000535236 ADA2Q9NZK5 511 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 HAUS5O94927 633 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 SSTR3P32745 418 aaPredicted RBP19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 GTF2H3Q13889 308 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 SMAD1Q15797 465 aaKnown RBP19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 SARM1Q6SZW1 724 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 GRID2IPA4D2P6 1211 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 PP2D1A8MPX8 630 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 EYA4O95677 639 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 TYK2P29597 1187 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 C1orf146Q5VVC0 180 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 NUDCD3Q8IVD9 361 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 TBC1D19Q8N5T2 526 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 KDM4CQ9H3R0 1056 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 TADA2AO75478 443 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 COG2Q14746 738 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 TAGAPQ8N103 731 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 APPL2Q8NEU8 664 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 KATNAL1Q9BW62 490 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 SLC13A1Q9BZW2 595 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 GTPBP10A4D1E9 387 aaKnown RBP19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 ATP9BO43861 1147 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 ORC4O43929 436 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 MICALL2Q8IY33 904 aa19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 PPHLN1Q8NEY8 458 aaKnown RBP19.22■□□□□ 0.67
SFSWAP-203ENST00000535236 PFASO15067 1338 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 GSG1L2A8MUP6 293 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 KIAA0391O15091 583 aaKnown RBP19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 FLOT2Q14254 428 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 AP1ARQ63HQ0 302 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 OR9Q1Q8NGQ5 310 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 PCDHB8Q9UN66 801 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 POLE2P56282 527 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 CEP55Q53EZ4 464 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 PATL1Q86TB9 770 aaKnown RBP19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 RFX7Q2KHR2 1363 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 RNF103-CHMP3A0A140T963 221 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 NCK2O43639 380 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 OTUB1Q96FW1 271 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms