RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 DOK3Q7L591 496 aa5.39□□□□□ -1.55
ATPAF1-211ENST00000534216 FAM83AQ86UY5 434 aa5.39□□□□□ -1.55
ATPAF1-211ENST00000534216 MDM1Q8TC05 714 aa5.39□□□□□ -1.55
ATPAF1-211ENST00000534216 CACTINQ8WUQ7 758 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-211ENST00000534216 PGBD4Q96DM1 585 aa5.39□□□□□ -1.55
ATPAF1-211ENST00000534216 SLC2A13Q96QE2 648 aa5.39□□□□□ -1.55
ATPAF1-211ENST00000534216 LSM14BQ9BX40 385 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-211ENST00000534216 CPEB1Q9BZB8 566 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-211ENST00000534216 BCO1Q9HAY6 547 aa5.39□□□□□ -1.55
ATPAF1-211ENST00000534216 TRHDEQ9UKU6 1024 aa5.39□□□□□ -1.55
ATPAF1-211ENST00000534216 ZBTB21Q9ULJ3 1066 aa5.39□□□□□ -1.55
ATPAF1-211ENST00000534216 GOLGA6L6A8MZA4 724 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 ALG1L2C9J202 215 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 KATNA1O75449 491 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 C6P13671 934 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 HK1P19367 917 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 TACR2P21452 398 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 ECHS1P30084 290 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 DGCR2P98153 550 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 PTH1RQ03431 593 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 ITKQ08881 620 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 PRAMEF14Q5SWL7 426 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 NAIF1Q69YI7 327 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 PGM2L1Q6PCE3 622 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 PDZD4Q76G19 769 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 GPRIN1Q7Z2K8 1008 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 Q8N1X5 172 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 C1orf162Q8NEQ5 155 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 OR7D4Q8NG98 312 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 OR52N2Q8NGI0 321 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 ZCRB1Q8TBF4 217 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 HOXB13Q92826 284 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 MTMR8Q96EF0 704 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 CEP95Q96GE4 821 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 PLEKHG4BQ96PX9 1271 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 CCDC8Q9H0W5 538 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 PARPBPQ9NWS1 579 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 HDAC5Q9UQL6 1122 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 PCDHGA2Q9Y5H1 932 aa5.38□□□□□ -1.55
ATPAF1-211ENST00000534216 B5MCH6 92 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 GABRDO14764 452 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 MT-CO1P00395 513 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 RBP3P10745 1247 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 HSP90B1P14625 803 aaKnown RBP5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 GSPT1P15170 499 aaKnown RBP5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 TOB2Q14106 344 aaPredicted RBP5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 CLUL1Q15846 466 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 PTPROQ16827 1216 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 XYLT1Q86Y38 959 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 TRMT2AQ8IZ69 625 aaKnown RBP5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 FAM177A1Q8N128 213 aaPredicted RBP5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 REPS2Q8NFH8 660 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 SSH1Q8WYL5 1049 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 FAXDC2Q96IV6 333 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 ADI1Q9BV57 179 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 ZNF341Q9BYN7 854 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 BRINP2Q9C0B6 783 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 MKS1Q9NXB0 559 aa5.37□□□□□ -1.55
ATPAF1-211ENST00000534216 ANKRD62A6NC57 917 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 GRXCR1A8MXD5 290 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 PRR5-ARHGAP8B1AHC4 643 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 MYBL2P10244 700 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 PTPN7P35236 360 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 SREBF1P36956 1147 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 FLT3LGP49771 235 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 MGAT2Q10469 447 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 SEPT2Q15019 361 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 NOMO1Q15155 1222 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 VPS72Q15906 364 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 ABCB5Q2M3G0 1257 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 MFSD14BQ5SR56 506 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 ANKS6Q68DC2 871 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 JADE3Q92613 823 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 GPATCH3Q96I76 525 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 CSRNP2Q9H175 543 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 WASHC2CQ9Y4E1 1318 aa5.36□□□□□ -1.55
ATPAF1-211ENST00000534216 NPIPB8E9PQR5 432 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 FZD9O00144 591 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 WNT10BO00744 389 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 PCDHGA12O60330 932 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 SLC25A3Q00325 362 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 TUBA3CQ13748 450 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 CSRP2Q16527 193 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 LSM12Q3MHD2 195 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 RABL3Q5HYI8 236 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 FAM47AQ5JRC9 791 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 TUBA3EQ6PEY2 450 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 ZNF572Q7Z3I7 529 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 PQLC1Q8N2U9 271 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 PPM1NQ8N819 430 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 FUBP3Q96I24 572 aaKnown RBP eCLIP5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 UHRF1Q96T88 793 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 KCNH6Q9H252 994 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 DNM3Q9UQ16 869 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 CLCA2Q9UQC9 943 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 PCDHGA9Q9Y5G4 932 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 PCDHGA8Q9Y5G5 932 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 PCDHGA7Q9Y5G6 932 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 PCDHGA6Q9Y5G7 932 aa5.35□□□□□ -1.55
ATPAF1-211ENST00000534216 PCDHGA3Q9Y5H0 932 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms