RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 ZNF445P59923 1031 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 PSMC5P62195 406 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 CYP4A11Q02928 519 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 TNFAIP2Q03169 654 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 CCDC173Q0VFZ6 552 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 HYAL2Q12891 473 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 PNOCQ13519 176 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 DOC2BQ14184 412 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 ADGRE1Q14246 886 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 ARHGEF6Q15052 776 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 POSTNQ15063 836 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 ZRSR1Q15695 479 aaKnown RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 UGCGQ16739 394 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 CCDC144BQ3MJ40 725 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 HSDL1Q3SXM5 330 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 GJC2Q5T442 439 aaPredicted RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 NT5DC1Q5TFE4 455 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 MFSD14CQ5VZR4 134 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 PDE12Q6L8Q7 609 aaKnown RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 SWSAP1Q6NVH7 229 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 MIS18BP1Q6P0N0 1132 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 CNNM4Q6P4Q7 775 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 XKR5Q6UX68 686 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 SV2BQ7L1I2 683 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 CCDC60Q8IWA6 550 aaPredicted RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 TPH2Q8IWU9 490 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 DHX37Q8IY37 1157 aaKnown RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 GRAMD1CQ8IYS0 662 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 CEP57L1Q8IYX8 460 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 SYT2Q8N9I0 419 aaPredicted RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 TRPV1Q8NER1 839 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 SEPT1Q8WYJ6 367 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 EDEM1Q92611 657 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 LARP4BQ92615 738 aaKnown RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 STAMQ92783 540 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 CDK5RAP3Q96JB5 506 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 GPR20Q99678 358 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 C7orf25Q9BPX7 421 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 FUCA2Q9BTY2 467 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 GZF1Q9H116 711 aaPredicted RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 ZSWIM4Q9H7M6 989 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 ANKEF1Q9NU02 776 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 ABI2Q9NYB9 513 aaPredicted RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 TCEAL9Q9UHQ7 104 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 ZHX1Q9UKY1 873 aaPredicted RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 DNM3Q9UQ16 869 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 GNEQ9Y223 722 aaKnown RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 USTQ9Y2C2 406 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 Q9Y3F1 56 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 SAMM50Q9Y512 469 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 PCDHA5Q9Y5H7 936 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 IGSF9BQ9UPX0 1349 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 ARID2Q68CP9 1835 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 SYCE3A1L190 88 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 MYMKA6NI61 221 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 KLRC4O43908 158 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 ADCY3O60266 1144 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 DKC1O60832 514 aaKnown RBP eCLIP6.81□□□□□ -1.32
CMTM1-220ENST00000534143 MYL1P05976 194 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 CYP11B2P19099 503 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 MPSTP25325 297 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 CASP1P29466 404 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 TCF7P36402 384 aaPredicted RBP6.81□□□□□ -1.32
CMTM1-220ENST00000534143 EIF1AXP47813 144 aaKnown RBP6.81□□□□□ -1.32
CMTM1-220ENST00000534143 NKX3-2P78367 333 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 AMPD3Q01432 767 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 NRG1Q02297 640 aaPredicted RBP6.81□□□□□ -1.32
CMTM1-220ENST00000534143 SP4Q02446 784 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 CACNB2Q08289 660 aaPredicted RBP6.81□□□□□ -1.32
CMTM1-220ENST00000534143 CUL4BQ13620 913 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 ARSHQ5FYA8 562 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 MAP3K21Q5TCX8 1036 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 SHISA2Q6UWI4 295 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 CTU1Q7Z7A3 348 aaKnown RBP6.81□□□□□ -1.32
CMTM1-220ENST00000534143 CKAP2LQ8IYA6 745 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 RASSF8Q8NHQ8 419 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 AFAP1L1Q8TED9 768 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 PIGOQ8TEQ8 1089 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 ERCC4Q92889 916 aaPredicted RBP6.81□□□□□ -1.32
CMTM1-220ENST00000534143 ATP6V0A1Q93050 837 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 DNAJC19Q96DA6 116 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 CCDC34Q96HJ3 373 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 SPATA33Q96N06 139 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 LXNQ9BS40 222 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 TRIM9Q9C026 710 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 GABBR1Q9UBS5 961 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 HOOK1Q9UJC3 728 aaKnown RBP6.81□□□□□ -1.32
CMTM1-220ENST00000534143 DBR1Q9UK59 544 aaKnown RBP6.81□□□□□ -1.32
CMTM1-220ENST00000534143 FAM184BQ9ULE4 1060 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 PDE4DIPQ5VU43 2346 aa6.81□□□□□ -1.32
CMTM1-220ENST00000534143 EMSYQ7Z589 1322 aa6.8□□□□□ -1.32
CMTM1-220ENST00000534143 NOP56O00567 594 aaKnown RBP6.8□□□□□ -1.32
CMTM1-220ENST00000534143 DYNC1LI2O43237 492 aaPredicted RBP6.8□□□□□ -1.32
CMTM1-220ENST00000534143 DUSP11O75319 330 aaKnown RBP6.8□□□□□ -1.32
CMTM1-220ENST00000534143 PPFIA4O75335 1185 aa6.8□□□□□ -1.32
CMTM1-220ENST00000534143 KIF4AO95239 1232 aa6.8□□□□□ -1.32
CMTM1-220ENST00000534143 HMGCRP04035 888 aa6.8□□□□□ -1.32
CMTM1-220ENST00000534143 PDGFAP04085 211 aa6.8□□□□□ -1.32
CMTM1-220ENST00000534143 AKR1A1P14550 325 aa6.8□□□□□ -1.32
CMTM1-220ENST00000534143 PCSK2P16519 638 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms