RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 TGFB1I1O43294 461 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 BMP6P22004 513 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 GRM5P41594 1212 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 CAVIN1Q6NZI2 390 aaKnown RBP17.04■□□□□ 0.32
CTTN-215ENST00000533931 SLC9A9Q8IVB4 645 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
CTTN-215ENST00000533931 TCHPQ9BT92 498 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 KIAA1586Q9HCI6 787 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 AGPAT3Q9NRZ7 376 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 DACH1Q9UI36 760 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 IPPQ9Y573 584 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 PDE4DIPQ5VU43 2346 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 COL4A6Q14031 1691 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 TET1Q8NFU7 2136 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 ZBBXA8MT70 800 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 OGTO15294 1046 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 INPPL1O15357 1258 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 NPTXRO95502 500 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 LDHAP00338 332 aaKnown RBP17.03■□□□□ 0.32
CTTN-215ENST00000533931 PRCPP42785 496 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 LRRC63Q05C16 580 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 SHHQ15465 462 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 EDRF1Q3B7T1 1238 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 ZCWPW2Q504Y3 356 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 CENPPQ6IPU0 288 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.03■□□□□ 0.32
CTTN-215ENST00000533931 TDHQ8IZJ6 230 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 SMG8Q8ND04 991 aaKnown RBP17.03■□□□□ 0.32
CTTN-215ENST00000533931 CCDC94Q9BW85 323 aaPredicted RBP17.03■□□□□ 0.32
CTTN-215ENST00000533931 EIF2AQ9BY44 585 aaKnown RBP17.03■□□□□ 0.32
CTTN-215ENST00000533931 ANKFY1Q9P2R3 1169 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 PCDHB7Q9Y5E2 793 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.03■□□□□ 0.32
CTTN-215ENST00000533931 MICAL3Q7RTP6 2002 aa17.03■□□□□ 0.32
CTTN-215ENST00000533931 ANKRD63C9JTQ0 380 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 CALUO43852 315 aaPredicted RBP17.02■□□□□ 0.32
CTTN-215ENST00000533931 FAM189A1O60320 539 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 CLTAP09496 248 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 ATF7P17544 494 aaPredicted RBP17.02■□□□□ 0.32
CTTN-215ENST00000533931 ADSSP30520 456 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 NLRP12P59046 1061 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 C9orf50Q5SZB4 431 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 NELFCDQ8IXH7 590 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 POMGNT1Q8WZA1 660 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 TSPAN18Q96SJ8 248 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 MSTO1Q9BUK6 570 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 TOPORSQ9NS56 1045 aaPredicted RBP17.02■□□□□ 0.32
CTTN-215ENST00000533931 CXXC1Q9P0U4 656 aaPredicted RBP17.02■□□□□ 0.32
CTTN-215ENST00000533931 AGO2Q9UKV8 859 aaKnown RBP17.02■□□□□ 0.32
CTTN-215ENST00000533931 LRFN2Q9ULH4 789 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 USP20Q9Y2K6 914 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 GIT1Q9Y2X7 761 aa17.02■□□□□ 0.32
CTTN-215ENST00000533931 BICDL2A1A5D9 508 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 PPP1R3GB7ZBB8 358 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 BIN1O00499 593 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 GJB5O95377 273 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 ITGA4P13612 1032 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 ATP2A2P16615 1042 aaKnown RBP17.01■□□□□ 0.31
CTTN-215ENST00000533931 CCNE1P24864 410 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 RPL13P26373 211 aaKnown RBP17.01■□□□□ 0.31
CTTN-215ENST00000533931 DEFB103AP81534 67 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 ARMCX5Q6P1M9 558 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 SASS6Q6UVJ0 657 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 HERC6Q8IVU3 1022 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 SMYD4Q8IYR2 804 aaPredicted RBP17.01■□□□□ 0.31
CTTN-215ENST00000533931 ZBTB45Q96K62 511 aaPredicted RBP17.01■□□□□ 0.31
CTTN-215ENST00000533931 FBXL18Q96ME1 805 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 TSG101Q99816 390 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 HAPLN2Q9GZV7 340 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 PLEKHA5Q9HAU0 1116 aa17.01■□□□□ 0.31
CTTN-215ENST00000533931 MAPK13O15264 365 aa17■□□□□ 0.31
CTTN-215ENST00000533931 EXTL3O43909 919 aa17■□□□□ 0.31
CTTN-215ENST00000533931 DGKIO75912 1065 aa17■□□□□ 0.31
CTTN-215ENST00000533931 ADRB2P07550 413 aa17■□□□□ 0.31
CTTN-215ENST00000533931 ERCC5P28715 1186 aaPredicted RBP17■□□□□ 0.31
CTTN-215ENST00000533931 MATR3P43243 847 aaKnown RBP eCLIP17■□□□□ 0.31
CTTN-215ENST00000533931 YARSP54577 528 aaKnown RBP17■□□□□ 0.31
CTTN-215ENST00000533931 HTRA4P83105 476 aaPredicted RBP17■□□□□ 0.31
CTTN-215ENST00000533931 STX1AQ16623 288 aa17■□□□□ 0.31
CTTN-215ENST00000533931 XKR4Q5GH76 650 aa17■□□□□ 0.31
CTTN-215ENST00000533931 GLB1LQ6UWU2 654 aa17■□□□□ 0.31
CTTN-215ENST00000533931 CHRDL2Q6WN34 429 aa17■□□□□ 0.31
CTTN-215ENST00000533931 CDR2LQ86X02 465 aaPredicted RBP17■□□□□ 0.31
CTTN-215ENST00000533931 CD302Q8IX05 232 aa17■□□□□ 0.31
CTTN-215ENST00000533931 ZC3H3Q8IXZ2 948 aaKnown RBP17■□□□□ 0.31
CTTN-215ENST00000533931 XXYLT1Q8NBI6 393 aa17■□□□□ 0.31
CTTN-215ENST00000533931 P2RX5Q93086 422 aa17■□□□□ 0.31
CTTN-215ENST00000533931 ACAP3Q96P50 834 aa17■□□□□ 0.31
CTTN-215ENST00000533931 CBWD1Q9BRT8 395 aa17■□□□□ 0.31
CTTN-215ENST00000533931 MRPL9Q9BYD2 267 aaKnown RBP17■□□□□ 0.31
CTTN-215ENST00000533931 TMEM117Q9H0C3 514 aa17■□□□□ 0.31
CTTN-215ENST00000533931 NXF3Q9H4D5 531 aaKnown RBP17■□□□□ 0.31
CTTN-215ENST00000533931 RSAD1Q9HA92 442 aa17■□□□□ 0.31
CTTN-215ENST00000533931 RC3H2Q9HBD1 1191 aaKnown RBP17■□□□□ 0.31
CTTN-215ENST00000533931 ANO10Q9NW15 660 aa17■□□□□ 0.31
CTTN-215ENST00000533931 DMAC2Q9NW81 257 aa17■□□□□ 0.31
CTTN-215ENST00000533931 PCDH10Q9P2E7 1040 aa17■□□□□ 0.31
CTTN-215ENST00000533931 CPSF3Q9UKF6 684 aaKnown RBP17■□□□□ 0.31
CTTN-215ENST00000533931 TTC3P53804 2025 aa16.99■□□□□ 0.31
CTTN-215ENST00000533931 CARNS1A5YM72 827 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms