RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 KHNYNO15037 678 aaKnown RBP11.97□□□□□ -0.49
CSDE1-215ENST00000533818 MAGEB2O15479 319 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 AKAP3O75969 853 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 EFEMP2O95967 443 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 POMCP01189 267 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 C8AP07357 584 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 GPC3P51654 580 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 ELF2Q15723 593 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 MAP4K3Q8IVH8 894 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 PIBF1Q8WXW3 757 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 ZNF302Q9NR11 478 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 FBXW11Q9UKB1 542 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 DOCK6Q96HP0 2047 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 ATP4AP20648 1035 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 GDI1P31150 447 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 HOXA9P31269 272 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 RAB27AP51159 221 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 CREMQ03060 361 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 USP41Q3LFD5 358 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 DGKKQ5KSL6 1271 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 IFIT1BQ5T764 474 aaKnown RBP11.96□□□□□ -0.49
CSDE1-215ENST00000533818 SWSAP1Q6NVH7 229 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 ABHD15Q6UXT9 468 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 AGMOQ6ZNB7 445 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 CCDC60Q8IWA6 550 aaPredicted RBP11.96□□□□□ -0.49
CSDE1-215ENST00000533818 GPR65Q8IYL9 337 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 LRRC71Q8N4P6 559 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 NLRP7Q8WX94 980 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 DUSP15Q9H1R2 295 aaPredicted RBP11.96□□□□□ -0.49
CSDE1-215ENST00000533818 ZFP14Q9HCL3 533 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 ZSWIM5Q9P217 1185 aa11.96□□□□□ -0.49
CSDE1-215ENST00000533818 DNMT3BQ9UBC3 853 aaKnown RBP11.96□□□□□ -0.49
CSDE1-215ENST00000533818 PIN4Q9Y237 131 aaKnown RBP11.96□□□□□ -0.49
CSDE1-215ENST00000533818 EVPLQ92817 2033 aa11.96□□□□□ -0.5
CSDE1-215ENST00000533818 ZMYM6O95789 1325 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 B4E1Z4 1266 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 MAP3K13O43283 966 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 CYTH3O43739 400 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 EXTL3O43909 919 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 RHOBTB1O94844 696 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 CCNE2O96020 404 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 NT5C2P49902 561 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 ITGB3BPQ13352 177 aaPredicted RBP11.95□□□□□ -0.5
CSDE1-215ENST00000533818 POTEHQ6S545 545 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 ZNF843Q8N446 348 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 GCOM2Q9BZD3 368 aaPredicted RBP11.95□□□□□ -0.5
CSDE1-215ENST00000533818 RSAD1Q9HA92 442 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 HELLSQ9NRZ9 838 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 PCDHB2Q9Y5E7 798 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 ACACAQ13085 2346 aa11.95□□□□□ -0.5
CSDE1-215ENST00000533818 F8W810 466 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 ZNF263O14978 683 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 NR1I2O75469 434 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 PSMC3P17980 439 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 FCARP24071 287 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 KIF5BP33176 963 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 MLLT6P55198 1093 aaPredicted RBP11.94□□□□□ -0.5
CSDE1-215ENST00000533818 FAM78AQ5JUQ0 283 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 C1orf228Q6PIY5 440 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 RAB44Q7Z6P3 723 aaPredicted RBP11.94□□□□□ -0.5
CSDE1-215ENST00000533818 COLGALT2Q8IYK4 626 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 LINC01465Q8N7H1 131 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 SLC7A14Q8TBB6 771 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 MDM1Q8TC05 714 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 CRELD1Q96HD1 420 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 MXRA8Q9BRK3 442 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 UBAC1Q9BSL1 405 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 COLEC11Q9BWP8 271 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 GPR62Q9BZJ7 368 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 CLMPQ9H6B4 373 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 CEP131Q9UPN4 1083 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 CELSR3Q9NYQ7 3312 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 SPAG17Q6Q759 2223 aa11.94□□□□□ -0.5
CSDE1-215ENST00000533818 APC2O95996 2303 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 DDX39AO00148 427 aaKnown RBP11.93□□□□□ -0.5
CSDE1-215ENST00000533818 ZNF213O14771 459 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 ATXN7O15265 892 aaPredicted RBP11.93□□□□□ -0.5
CSDE1-215ENST00000533818 POU2F2P09086 479 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 CEBPBP17676 345 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 SFPQP23246 707 aaKnown RBP eCLIP11.93□□□□□ -0.5
CSDE1-215ENST00000533818 KPNA1P52294 538 aaPredicted RBP11.93□□□□□ -0.5
CSDE1-215ENST00000533818 IRX4P78413 519 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 ZNF423Q2M1K9 1284 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 SLC5A9Q2M3M2 681 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 WDR44Q5JSH3 913 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 MIS18BP1Q6P0N0 1132 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 FUT10Q6P4F1 479 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 PRSS55Q6UWB4 352 aaPredicted RBP11.93□□□□□ -0.5
CSDE1-215ENST00000533818 MSANTD3Q96H12 275 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 APOL6Q9BWW8 343 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 PSTPIP2Q9H939 334 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 AGO4Q9HCK5 861 aaKnown RBP11.93□□□□□ -0.5
CSDE1-215ENST00000533818 ZBTB40Q9NUA8 1239 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 PCDHB15Q9Y5E8 787 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 MTCL1Q9Y4B5 1905 aaKnown RBP11.93□□□□□ -0.5
CSDE1-215ENST00000533818 CACNA1EQ15878 2313 aa11.93□□□□□ -0.5
CSDE1-215ENST00000533818 TTC41PQ6P2S7 1318 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 CNTNAP2Q9UHC6 1331 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 SPDYE3A6NKU9 549 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 PATE3B3GLJ2 98 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms