RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 NYAP1Q6ZVC0 841 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 FASTKD5Q7L8L6 764 aaKnown RBP18.66■□□□□ 0.58
PHRF1-205ENST00000533464 SNF8Q96H20 258 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 TFR2Q9UP52 801 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.66■□□□□ 0.58
PHRF1-205ENST00000533464 TMEM131LA2VDJ0 1609 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 TCRBV5S4A2TA0A5A2 114 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 COPB2P35606 906 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 NPEPPSP55786 919 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 NR1H3Q13133 447 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 SEPT1Q8WYJ6 367 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 GOLGA8QA0A0J9YX86 632 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 GOLGA8OA6NCC3 632 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 GOLGA8NF8WBI6 632 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 ST3GAL1Q11201 340 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 PDIA2Q13087 525 aaKnown RBP18.66■□□□□ 0.58
PHRF1-205ENST00000533464 IZUMO3Q5VZ72 239 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 KCNV1Q6PIU1 500 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 ZBED8Q8IZ13 594 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 TTC39CQ8N584 583 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 CPA5Q8WXQ8 436 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 MSH4O15457 936 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 CREB3O43889 395 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 NCF2P19878 526 aaPredicted RBP18.65■□□□□ 0.58
PHRF1-205ENST00000533464 SCN4BQ8IWT1 228 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 TUBB6Q9BUF5 446 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 STAP1Q9ULZ2 295 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 ANGPTL3Q9Y5C1 460 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 ADORA2BP29275 332 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 KRT17Q04695 432 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 RTFDC1Q9BY42 306 aaPredicted RBP18.65■□□□□ 0.58
PHRF1-205ENST00000533464 DDX56Q9NY93 547 aaKnown RBP18.65■□□□□ 0.58
PHRF1-205ENST00000533464 MID2Q9UJV3 735 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 EIF3DO15371 548 aaKnown RBP eCLIP18.65■□□□□ 0.58
PHRF1-205ENST00000533464 TTI1O43156 1089 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 S100BP04271 92 aaPredicted RBP18.65■□□□□ 0.58
PHRF1-205ENST00000533464 TSTA3Q13630 321 aaPredicted RBP18.65■□□□□ 0.58
PHRF1-205ENST00000533464 PPM1NQ8N819 430 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 UVRAGQ9P2Y5 699 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 CYP11B2P19099 503 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 CDH6P55285 790 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 KLHL38Q2WGJ6 581 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 SYT2Q8N9I0 419 aaPredicted RBP18.65■□□□□ 0.58
PHRF1-205ENST00000533464 MKNK1Q9BUB5 465 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 Q9H521 79 aa18.65■□□□□ 0.58
PHRF1-205ENST00000533464 RBM12Q9NTZ6 932 aaKnown RBP18.65■□□□□ 0.58
PHRF1-205ENST00000533464 MROH2AA6NES4 1674 aa18.64■□□□□ 0.58
PHRF1-205ENST00000533464 MYO1CO00159 1063 aa18.64■□□□□ 0.58
PHRF1-205ENST00000533464 CSPG5O95196 566 aa18.64■□□□□ 0.58
PHRF1-205ENST00000533464 KLRC1P26715 233 aa18.64■□□□□ 0.58
PHRF1-205ENST00000533464 PRKCEQ02156 737 aa18.64■□□□□ 0.58
PHRF1-205ENST00000533464 KLHDC7AQ5VTJ3 777 aa18.64■□□□□ 0.58
PHRF1-205ENST00000533464 THEM5Q8N1Q8 247 aa18.64■□□□□ 0.58
PHRF1-205ENST00000533464 GBP7Q8N8V2 638 aaPredicted RBP18.64■□□□□ 0.58
PHRF1-205ENST00000533464 ACER1Q8TDN7 264 aa18.64■□□□□ 0.58
PHRF1-205ENST00000533464 TRIM55Q9BYV6 548 aa18.64■□□□□ 0.58
PHRF1-205ENST00000533464 SLIT1O75093 1534 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 XPAP23025 273 aaPredicted RBP18.64■□□□□ 0.57
PHRF1-205ENST00000533464 NCOA4Q13772 614 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 CCNI2Q6ZMN8 369 aaPredicted RBP18.64■□□□□ 0.57
PHRF1-205ENST00000533464 PRMT6Q96LA8 375 aaPredicted RBP18.64■□□□□ 0.57
PHRF1-205ENST00000533464 LRGUKQ96M69 825 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 DEFB129Q9H1M3 183 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 DHX35Q9H5Z1 703 aaKnown RBP18.64■□□□□ 0.57
PHRF1-205ENST00000533464 PI4K2BG5E9Z4 385 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 KRT3P12035 628 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 GUCY2CP25092 1073 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 SLC1A1P43005 524 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 POLR3CQ9BUI4 534 aaPredicted RBP18.64■□□□□ 0.57
PHRF1-205ENST00000533464 MYOZ2Q9NPC6 264 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 VWDEQ8N2E2 1590 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 RPS6P62753 249 aaKnown RBP18.64■□□□□ 0.57
PHRF1-205ENST00000533464 PKN1Q16512 942 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 KIAA1755Q5JYT7 1200 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 CRLF3Q8IUI8 442 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 NOA1Q8NC60 698 aaKnown RBP18.64■□□□□ 0.57
PHRF1-205ENST00000533464 CERKQ8TCT0 537 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 ATG4CQ96DT6 458 aa18.64■□□□□ 0.57
PHRF1-205ENST00000533464 MOV10L1Q9BXT6 1211 aaKnown RBP18.64■□□□□ 0.57
PHRF1-205ENST00000533464 POLRMTO00411 1230 aaKnown RBP18.63■□□□□ 0.57
PHRF1-205ENST00000533464 PMLP29590 882 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 EPHB1P54762 984 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 NCAPHQ15003 741 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 EMC2Q15006 297 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 HEATR6Q6AI08 1181 aaKnown RBP18.63■□□□□ 0.57
PHRF1-205ENST00000533464 REXO1L1PQ8IX06 675 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 VPS39Q96JC1 886 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 KBTBD4Q9NVX7 518 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 LRRC14Q15048 493 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 C3orf67Q6ZVT6 689 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 ATL2Q8NHH9 583 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 ACAP3Q96P50 834 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 TRIM51Q9BSJ1 452 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 KLHL11Q9NVR0 708 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 GGA3Q9NZ52 723 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 PLAGL2Q9UPG8 496 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 F5H423 210 aaPredicted RBP18.63■□□□□ 0.57
PHRF1-205ENST00000533464 CTIFO43310 598 aaKnown RBP18.63■□□□□ 0.57
PHRF1-205ENST00000533464 ARSEP51690 589 aa18.63■□□□□ 0.57
PHRF1-205ENST00000533464 BIRC2Q13490 618 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms