RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 PBXIP1Q96AQ6 731 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 PRIMPOLQ96LW4 560 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 NECTIN4Q96NY8 510 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 FZD8Q9H461 694 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 POMKQ9H5K3 350 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 PRMT7Q9NVM4 692 aaPredicted RBP12.52□□□□□ -0.41
CLCF1-202ENST00000533438 DZANK1Q9NVP4 752 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 MTCL1Q9Y4B5 1905 aaKnown RBP12.52□□□□□ -0.41
CLCF1-202ENST00000533438 KMT2EQ8IZD2 1858 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 NPTXRO95502 500 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 CNPP09543 421 aaKnown RBP12.51□□□□□ -0.41
CLCF1-202ENST00000533438 CYP11B2P19099 503 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 AKAP5P24588 427 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 OR1G1P47890 313 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 CLCN4P51793 760 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 GNL2Q13823 731 aaKnown RBP12.51□□□□□ -0.41
CLCF1-202ENST00000533438 PDIA5Q14554 519 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 KIAA1841Q6NSI8 718 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 CES5AQ6NT32 575 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 PADI6Q6TGC4 694 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 PPFIBP1Q86W92 1011 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 FBXL6Q8N531 539 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 IGSF22Q8N9C0 903 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 ASIC4Q96FT7 647 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 INTS4Q96HW7 963 aaKnown RBP12.51□□□□□ -0.41
CLCF1-202ENST00000533438 KLHL5Q96PQ7 755 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 PHOX2BQ99453 314 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 HERC2P3Q9BVR0 1158 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 TRIM6Q9C030 488 aaPredicted RBP12.51□□□□□ -0.41
CLCF1-202ENST00000533438 CCDC113Q9H0I3 377 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 IRF2BPLQ9H1B7 796 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 NOL7Q9UMY1 257 aaKnown RBP12.51□□□□□ -0.41
CLCF1-202ENST00000533438 PRG3Q9Y2Y8 225 aaPredicted RBP12.51□□□□□ -0.41
CLCF1-202ENST00000533438 PCDHB6Q9Y5E3 794 aa12.51□□□□□ -0.41
CLCF1-202ENST00000533438 TRIP11Q15643 1979 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 MYO10Q9HD67 2058 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 ARHGEF35A5YM69 484 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 TTLL13PA6NNM8 815 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 PROB1E7EW31 1015 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 F8W810 466 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 EDN1P05305 212 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 SSBP05455 408 aaKnown RBP eCLIP12.5□□□□□ -0.41
CLCF1-202ENST00000533438 CCT6AP40227 531 aaKnown RBP12.5□□□□□ -0.41
CLCF1-202ENST00000533438 MTHFRP42898 656 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 NAMPTP43490 491 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 SIGLEC14Q08ET2 396 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 PTGDRQ13258 359 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 PTPN21Q16825 1174 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 RARS2Q5T160 578 aaKnown RBP12.5□□□□□ -0.41
CLCF1-202ENST00000533438 KANK3Q6NY19 840 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 TAS1R1Q7RTX1 841 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 ZBTB8OSQ8IWT0 167 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 HACE1Q8IYU2 909 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 C12orf76Q8N812 135 aaPredicted RBP12.5□□□□□ -0.41
CLCF1-202ENST00000533438 TMEM87AQ8NBN3 555 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 FEZF2Q8TBJ5 459 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 RIPOR3Q96MK2 946 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 APOL6Q9BWW8 343 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 EMILIN2Q9BXX0 1053 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 C2orf40Q9H1Z8 148 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 PDZD7Q9H5P4 517 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 MRPL17Q9NRX2 175 aaKnown RBP12.5□□□□□ -0.41
CLCF1-202ENST00000533438 LRWD1Q9UFC0 647 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 NR2E1Q9Y466 385 aa12.5□□□□□ -0.41
CLCF1-202ENST00000533438 C2CD4DB7Z1M9 353 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 LAD1O00515 517 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 N4BP3O15049 544 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 WEE2P0C1S8 567 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 SP100P23497 879 aaPredicted RBP12.49□□□□□ -0.41
CLCF1-202ENST00000533438 KLRC2P26717 231 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 GRIK3Q13003 919 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 KIAA0319Q5VV43 1072 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 CABP7Q86V35 215 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 RPS6KC1Q96S38 1066 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 BHMT2Q9H2M3 363 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 SFXN1Q9H9B4 322 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.49□□□□□ -0.41
CLCF1-202ENST00000533438 CHST7Q9NS84 486 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 DAXXQ9UER7 740 aaPredicted RBP12.49□□□□□ -0.41
CLCF1-202ENST00000533438 PARP2Q9UGN5 583 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 SSX2IPQ9Y2D8 614 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 MYO15AQ9UKN7 3530 aa12.49□□□□□ -0.41
CLCF1-202ENST00000533438 ZFHX2Q9C0A1 2572 aaPredicted RBP12.49□□□□□ -0.41
CLCF1-202ENST00000533438 ACKR2O00590 384 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 TEX28O15482 410 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 NR1I2O75469 434 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 PRKCBP05771 671 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 URODP06132 367 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 PRPHP41219 470 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 GLUD2P49448 558 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 DSG1Q02413 1049 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 PRPF4BQ13523 1007 aaKnown RBP12.48□□□□□ -0.41
CLCF1-202ENST00000533438 PPP2R5AQ15172 486 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 IL17AQ16552 155 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 MAPK6Q16659 721 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 ATAT1Q5SQI0 421 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 TMC5Q6UXY8 1006 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 GPR149Q86SP6 731 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 SNX29Q8TEQ0 813 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms