RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 DPCR1Q3MIW9 517 aa23.05■■□□□ 1.28
PTP4A2-215ENST00000533408 KLHL10Q6JEL2 608 aa23.05■■□□□ 1.28
PTP4A2-215ENST00000533408 ZBTB33Q86T24 672 aa23.05■■□□□ 1.28
PTP4A2-215ENST00000533408 OSBPL7Q9BZF2 842 aa23.05■■□□□ 1.28
PTP4A2-215ENST00000533408 TOPORSQ9NS56 1045 aaPredicted RBP23.05■■□□□ 1.28
PTP4A2-215ENST00000533408 FRMD4BQ9Y2L6 1034 aa23.05■■□□□ 1.28
PTP4A2-215ENST00000533408 PCDHB7Q9Y5E2 793 aa23.05■■□□□ 1.28
PTP4A2-215ENST00000533408 ALPK3Q96L96 1907 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 ANKRD63C9JTQ0 380 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 CETN3O15182 167 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 NPTXRO95502 500 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 CLTAP09496 248 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 ACRP10323 421 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 MAGEA10P43363 369 aaPredicted RBP23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 TPD52L1Q16890 204 aaPredicted RBP23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 ZNF365Q70YC5 407 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 MRPL10Q7Z7H8 261 aaKnown RBP23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 USP37Q86T82 979 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 XXYLT1Q8NBI6 393 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 HERVK_113Q902F9 699 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 TSPAN18Q96SJ8 248 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 CDT1Q9H211 546 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 TMEM161AQ9NX61 479 aa23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.04■■□□□ 1.28
PTP4A2-215ENST00000533408 C9IYK1 514 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 EXTL3O43909 919 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 EXOC3O60645 756 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 ITGA4P13612 1032 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 GRM5P41594 1212 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 ADAM9Q13443 819 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 TMEM240Q5SV17 173 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 CD302Q8IX05 232 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 GPD1LQ8N335 351 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 PHOSPHO2Q8TCD6 241 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 ACAP3Q96P50 834 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 SEMA6BQ9H3T3 888 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 CTNND2Q9UQB3 1225 aa23.03■■□□□ 1.28
PTP4A2-215ENST00000533408 ZMYM2Q9UBW7 1377 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 TTLL13PA6NNM8 815 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 GNA14O95837 355 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 NR3C1P04150 777 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 EDN1P05305 212 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 CD44P16070 742 aaKnown RBP23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 NR2F2P24468 414 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 UBXN11Q5T124 520 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 EEF1DP3Q658K8 133 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 SLC39A4Q6P5W5 647 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 RTN4RL1Q86UN2 441 aaPredicted RBP23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 ECHDC2Q86YB7 292 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 NPAS4Q8IUM7 802 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 NOC3LQ8WTT2 800 aaKnown RBP23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 ZBTB45Q96K62 511 aaPredicted RBP23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 CEP63Q96MT8 703 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 UBE2OQ9C0C9 1292 aaKnown RBP23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 GZF1Q9H116 711 aaPredicted RBP23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 PLEKHA5Q9HAU0 1116 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 HSPBP1Q9NZL4 362 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 IPPQ9Y573 584 aa23.02■■□□□ 1.28
PTP4A2-215ENST00000533408 ZNF233A6NK53 670 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 ZBBXA8MT70 800 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 H0YGN5 161 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 MGEA5O60502 916 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 ADSSP30520 456 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 SURF1Q15526 300 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 ZCWPW2Q504Y3 356 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 ANKRD40Q6AI12 368 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 C16orf59Q7L2K0 433 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 OTOP2Q7RTS6 562 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 CDR2LQ86X02 465 aaPredicted RBP23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 THNSL1Q8IYQ7 743 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 CSGALNACT2Q8N6G5 542 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 BPIFA3Q9BQP9 254 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.01■■□□□ 1.272e-7■■□□□ 14.2
PTP4A2-215ENST00000533408 EIF2AQ9BY44 585 aaKnown RBP23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 RPF1Q9H9Y2 349 aaKnown RBP23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 DMAC2Q9NW81 257 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 USP20Q9Y2K6 914 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 GIT1Q9Y2X7 761 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 SLC4A7Q9Y6M7 1214 aa23.01■■□□□ 1.27
PTP4A2-215ENST00000533408 SMTNL1A8MU46 457 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 ABLIM1O14639 778 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 CLIC2O15247 247 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 MAPK13O15264 365 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 HARSP12081 509 aaKnown RBP23■■□□□ 1.27
PTP4A2-215ENST00000533408 BMP8BP34820 402 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 PSMC2P35998 433 aaKnown RBP23■■□□□ 1.27
PTP4A2-215ENST00000533408 CYP2J2P51589 502 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 LRSAM1Q6UWE0 723 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 FAM114A1Q8IWE2 563 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 ABI1Q8IZP0 508 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 ENOX1Q8TC92 643 aaKnown RBP23■■□□□ 1.27
PTP4A2-215ENST00000533408 SLC9A7Q96T83 725 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 CBWD1Q9BRT8 395 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 MKNK1Q9BUB5 465 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 KANSL3Q9P2N6 904 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 SIP14410 1827 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 DNAH12Q6ZR08 3092 aa23■■□□□ 1.27
PTP4A2-215ENST00000533408 IL18RAPO95256 599 aa22.99■■□□□ 1.27
PTP4A2-215ENST00000533408 EPB41P11171 864 aaKnown RBP22.99■■□□□ 1.27
PTP4A2-215ENST00000533408 ZNF445P59923 1031 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms