RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 CSPP1Q1MSJ5 1256 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 DCAF4L1Q3SXM0 396 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 SFR1Q86XK3 245 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 URGCPQ8TCY9 931 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 ZBTB45Q96K62 511 aaPredicted RBP21.8■■□□□ 1.08
CPSF1-209ENST00000532725 ZFP42Q96MM3 310 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 LMAN2LQ9H0V9 348 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 GDPD2Q9HCC8 539 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 SNTG2Q9NY99 539 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 PARP2Q9UGN5 583 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 CIZ1Q9ULV3 898 aaPredicted RBP21.8■■□□□ 1.08
CPSF1-209ENST00000532725 HPSEQ9Y251 543 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 MYO7AQ13402 2215 aa21.8■■□□□ 1.08
CPSF1-209ENST00000532725 EYSQ5T1H1 3165 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 FAM237AA0A1B0GTK4 181 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 K7ENM7 598 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 B4GALT3O60512 393 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 FGF18O76093 207 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 DDHD2O94830 711 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 POMCP01189 267 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 GAP43P17677 238 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 DNAJB1P25685 340 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 ANP32AP39687 249 aaKnown RBP21.79■■□□□ 1.08
CPSF1-209ENST00000532725 PBX3P40426 434 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 MLH1P40692 756 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 BCAR1P56945 870 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 CCDC85BQ15834 202 aaPredicted RBP21.79■■□□□ 1.08
CPSF1-209ENST00000532725 PTPROQ16827 1216 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 CNNM4Q6P4Q7 775 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 ZPBP2Q6X784 338 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 SLC17A8Q8NDX2 589 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 ZNF558Q96NG5 402 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 C7orf25Q9BPX7 421 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 PYM1Q9BRP8 204 aaKnown RBP21.79■■□□□ 1.08
CPSF1-209ENST00000532725 STRA6Q9BX79 667 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 TRIM9Q9C026 710 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 CDT1Q9H211 546 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 PANK4Q9NVE7 773 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 KLK14Q9P0G3 267 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 SEL1LQ9UBV2 794 aa21.79■■□□□ 1.08
CPSF1-209ENST00000532725 A0A1W2PQ27 194 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 A0A1W2PQ64 194 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 A0A1W2PQD8 194 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 TOM1L1O75674 476 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 GALTP07902 379 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 IDEP14735 1019 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 PFKFB1P16118 471 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 ALDH7A1P49419 539 aaKnown RBP21.78■■□□□ 1.08
CPSF1-209ENST00000532725 PLCB3Q01970 1234 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 RNASELQ05823 741 aaKnown RBP21.78■■□□□ 1.08
CPSF1-209ENST00000532725 ZC2HC1CQ53FD0 456 aaPredicted RBP21.78■■□□□ 1.08
CPSF1-209ENST00000532725 HERC4Q5GLZ8 1057 aaPredicted RBP21.78■■□□□ 1.08
CPSF1-209ENST00000532725 MPZL3Q6UWV2 235 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 APBB1IPQ7Z5R6 666 aaPredicted RBP21.78■■□□□ 1.08
CPSF1-209ENST00000532725 THNSL1Q8IYQ7 743 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 PPM1EQ8WY54 764 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 TCHPQ9BT92 498 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 MAGEF1Q9HAY2 307 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 SPG21Q9NZD8 308 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 DNAJB4Q9UDY4 337 aa21.78■■□□□ 1.08
CPSF1-209ENST00000532725 ZMYM2Q9UBW7 1377 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 PPP1R37O75864 691 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 PIGRP01833 764 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 SLFN14P0C7P3 912 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 MCF2P10911 925 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 ABCD1P33897 745 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 SCNN1GP51170 649 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 ZBTB33Q86T24 672 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 SLC39A11Q8N1S5 342 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 MICALL1Q8N3F8 863 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 POF1BQ8WVV4 589 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 HAPLN2Q9GZV7 340 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 CXCL16Q9H2A7 254 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 OLFML3Q9NRN5 406 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 TBC1D7Q9P0N9 293 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 SERTAD1Q9UHV2 236 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 KIAA1671Q9BY89 1806 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 PRUNE2Q8WUY3 3088 aa21.77■■□□□ 1.08
CPSF1-209ENST00000532725 NT5C1B-RDH14C9J2C7 533 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 ACTN4O43707 911 aaKnown RBP21.76■■□□□ 1.07
CPSF1-209ENST00000532725 ZC3H11AO75152 810 aaKnown RBP eCLIP21.76■■□□□ 1.07
CPSF1-209ENST00000532725 RECQL4O94761 1208 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 ALDH2P05091 517 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 GRM5P41594 1212 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 UBE3AQ05086 875 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 DSC1Q08554 894 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 ZNF568Q3ZCX4 644 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 COLGALT2Q8IYK4 626 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 CEP120Q8N960 986 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 TMEM175Q9BSA9 504 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 GBP3Q9H0R5 595 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 MRPL44Q9H9J2 332 aaKnown RBP21.76■■□□□ 1.07
CPSF1-209ENST00000532725 LZTS1Q9Y250 596 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 GDAQ9Y2T3 454 aa21.76■■□□□ 1.07
CPSF1-209ENST00000532725 COL4A4P53420 1690 aaPredicted RBP21.75■■□□□ 1.07
CPSF1-209ENST00000532725 CARNS1A5YM72 827 aa21.75■■□□□ 1.07
CPSF1-209ENST00000532725 CLDN3O15551 220 aa21.75■■□□□ 1.07
CPSF1-209ENST00000532725 PPM1AP35813 382 aa21.75■■□□□ 1.07
CPSF1-209ENST00000532725 SLC11A1P49279 550 aa21.75■■□□□ 1.07
CPSF1-209ENST00000532725 NDUFA8P51970 172 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms