RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 PCSK1NQ9UHG2 260 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 PYCARDQ9ULZ3 195 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 TCP1P17987 556 aaKnown RBP16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 PTPAQ15257 358 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 AMHR2Q16671 573 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 MGAT5BQ3V5L5 792 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 MAGOHBQ96A72 148 aaKnown RBP16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 SIK2Q9H0K1 926 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 SCINQ9Y6U3 715 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 CLTAP09496 248 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 RGS7P49802 495 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 SLC12A2P55011 1212 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 SLC26A4O43511 780 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 WEE2P0C1S8 567 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 ARID5BQ14865 1188 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 BTBD8Q5XKL5 378 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 CEP128Q6ZU80 1094 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 C4orf19Q8IY42 314 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 MTMR14Q8NCE2 650 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 HASPINQ8TF76 798 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 GRK7Q8WTQ7 553 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 DDX41Q9UJV9 622 aaKnown RBP16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 SYNGAP1Q96PV0 1343 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 CDC25BP30305 580 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 GBP1P32455 592 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 LAMTOR4Q0VGL1 99 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 RAB17Q9H0T7 212 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 MAN1A1P33908 653 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 FAM102AQ5T9C2 384 aaPredicted RBP16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 VSIG10LQ86VR7 867 aa16.81■□□□□ 0.28
PPFIA1-222ENST00000532504 EXTL3O43909 919 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 SDC4P31431 198 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 GUCY2FP51841 1108 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 RNF187Q5TA31 235 aaPredicted RBP16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 CCDC170Q8IYT3 715 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 KRT12Q99456 494 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 STRIP2Q9ULQ0 834 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 USP20Q9Y2K6 914 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 ZBTB39O15060 712 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 ITGB3P05106 788 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 LGALS2P05162 132 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 ZBTB48P10074 688 aaPredicted RBP16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 CLCN1P35523 988 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 NAMPTP43490 491 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 GFPT1Q06210 699 aaPredicted RBP16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 RNF219Q5W0B1 726 aaPredicted RBP16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 DARS2Q6PI48 645 aaKnown RBP16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 ANKRD23Q86SG2 305 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 SLC8A2Q9UPR5 921 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 CREB3O43889 395 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 IL18RAPO95256 599 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 HLA-DRAP01903 254 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 SAT1P21673 171 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 PRPSAP1Q14558 356 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 SGSM1Q2NKQ1 1148 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 TTC39CQ8N584 583 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 MCF2LO15068 1137 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 FMO5P49326 533 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 ETF1P62495 437 aaKnown RBP16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 IL31RAQ8NI17 732 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 C17orf75Q9HAS0 396 aa16.8■□□□□ 0.28
PPFIA1-222ENST00000532504 RIOK3O14730 519 aaKnown RBP16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 CRCPO75575 148 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 TOMM70O94826 608 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 PORCNQ9H237 461 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 SLC16A3O15427 465 aaKnown RBP16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 ATP11AP98196 1134 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 FAM110CQ1W6H9 321 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 OTOP1Q7RTM1 612 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 UHMK1Q8TAS1 419 aaKnown RBP16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 SAMD15Q9P1V8 674 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 KLRG2A4D1S0 409 aaPredicted RBP16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 HPDP32754 393 aaPredicted RBP16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 EPHB1P54762 984 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 DCAF4L1Q3SXM0 396 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 CC2D1AQ6P1N0 951 aaPredicted RBP16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 AAASQ9NRG9 546 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 RIPK3Q9Y572 518 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 TTC26A0AVF1 554 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 EML1O00423 815 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 EIF3DO15371 548 aaKnown RBP eCLIP16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 CALB1P05937 261 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 ATF2P15336 505 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 PLCB4Q15147 1175 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 SKA2Q8WVK7 121 aaPredicted RBP16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 ATRIPQ8WXE1 791 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 HPDLQ96IR7 371 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 ZNF512Q96ME7 567 aaPredicted RBP16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 STAP1Q9ULZ2 295 aa16.79■□□□□ 0.28
PPFIA1-222ENST00000532504 HMBSP08397 361 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 LRRC31Q6UY01 552 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 AGPAT3Q9NRZ7 376 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 AFG3L2Q9Y4W6 797 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 ATP2C2O75185 946 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 STAMBPO95630 424 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 FTLP02792 175 aaPredicted RBP16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 SV2CQ496J9 727 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 YAF2Q8IY57 180 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 DNAAF3Q8N9W5 541 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms