RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 REV3LO60673 3130 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 PP2D1A8MPX8 630 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 DCXO43602 365 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 HIP1RO75146 1068 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 TADA2AO75478 443 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 DDHD2O94830 711 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 CDC25AP30304 524 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 LONP1P36776 959 aaKnown RBP13.84□□□□□ -0.19
C11orf54-210ENST00000531516 TXLNAP40222 546 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 PEX3P56589 373 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 CREMQ03060 361 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 ATF7IP2Q5U623 682 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 CDR2LQ86X02 465 aaPredicted RBP13.84□□□□□ -0.19
C11orf54-210ENST00000531516 COLGALT2Q8IYK4 626 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 INTS4Q96HW7 963 aaKnown RBP13.84□□□□□ -0.19
C11orf54-210ENST00000531516 RIPOR3Q96MK2 946 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 ZFP42Q96MM3 310 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 PHF7Q9BWX1 381 aaPredicted RBP13.84□□□□□ -0.19
C11orf54-210ENST00000531516 MRPL4Q9BYD3 311 aaKnown RBP13.84□□□□□ -0.19
C11orf54-210ENST00000531516 TMEM134Q9H6X4 195 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 LARSQ9P2J5 1176 aaKnown RBP13.84□□□□□ -0.19
C11orf54-210ENST00000531516 HCFC2Q9Y5Z7 792 aa13.84□□□□□ -0.19
C11orf54-210ENST00000531516 PI4K2BG5E9Z4 385 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 CLASP2O75122 1294 aaKnown RBP13.83□□□□□ -0.2
C11orf54-210ENST00000531516 GLP2RO95838 553 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 SOD2P04179 222 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 KRT18P05783 430 aaKnown RBP13.83□□□□□ -0.2
C11orf54-210ENST00000531516 THP07101 528 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 ADH1AP07327 375 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 PDIA4P13667 645 aaKnown RBP13.83□□□□□ -0.2
C11orf54-210ENST00000531516 SCP2P22307 547 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 GUCY2CP25092 1073 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 MTHFRP42898 656 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 ELAVL2Q12926 359 aaKnown RBP13.83□□□□□ -0.2
C11orf54-210ENST00000531516 TUSC3Q13454 348 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 CBX2Q14781 532 aaPredicted RBP13.83□□□□□ -0.2
C11orf54-210ENST00000531516 ECM1Q16610 540 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 HYIQ5T013 277 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 RINT1Q6NUQ1 792 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 TMEM173Q86WV6 379 aaPredicted RBP13.83□□□□□ -0.2
C11orf54-210ENST00000531516 BSNDQ8WZ55 320 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 CCDC94Q9BW85 323 aaPredicted RBP13.83□□□□□ -0.2
C11orf54-210ENST00000531516 RNF39Q9H2S5 420 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 PDZD7Q9H5P4 517 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.83□□□□□ -0.2
C11orf54-210ENST00000531516 KLK14Q9P0G3 267 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 CCDC39Q9UFE4 941 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 NR2E1Q9Y466 385 aa13.83□□□□□ -0.2
C11orf54-210ENST00000531516 FNDC1Q4ZHG4 1894 aaPredicted RBP13.82□□□□□ -0.2
C11orf54-210ENST00000531516 WDR81Q562E7 1941 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 K7ELQ4 463 aaPredicted RBP13.82□□□□□ -0.2
C11orf54-210ENST00000531516 PLA2G4BP0C869 781 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 ABCD1P33897 745 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 NPTX2P47972 431 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 GLUD2P49448 558 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 DSC1Q08554 894 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 IL17AQ16552 155 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 USP41Q3LFD5 358 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 ATAT1Q5SQI0 421 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 SYT2Q8N9I0 419 aaPredicted RBP13.82□□□□□ -0.2
C11orf54-210ENST00000531516 PLIN2Q99541 437 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 KIFC3Q9BVG8 833 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 HERC2P3Q9BVR0 1158 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 CCDC113Q9H0I3 377 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 ADAM7Q9H2U9 754 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 SNTG2Q9NY99 539 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 TNFSF13BQ9Y275 285 aa13.82□□□□□ -0.2
C11orf54-210ENST00000531516 SF3B1O75533 1304 aaKnown RBP eCLIP13.82□□□□□ -0.2
C11orf54-210ENST00000531516 C2CD2LO14523 706 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 RECQL4O94761 1208 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 PLS3P13797 630 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 MATR3P43243 847 aaKnown RBP eCLIP13.81□□□□□ -0.2
C11orf54-210ENST00000531516 AFF1P51825 1210 aaKnown RBP13.81□□□□□ -0.2
C11orf54-210ENST00000531516 HSP90AA2PQ14568 343 aaPredicted RBP13.81□□□□□ -0.2
C11orf54-210ENST00000531516 SF3A1Q15459 793 aaKnown RBP13.81□□□□□ -0.2
C11orf54-210ENST00000531516 PTPN14Q15678 1187 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 ZNF568Q3ZCX4 644 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 PDXDC1Q6P996 788 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 C1orf186Q6ZWK4 172 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 ZBTB33Q86T24 672 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 HSCBQ8IWL3 235 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 GPR65Q8IYL9 337 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 SPIRE2Q8WWL2 714 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 AUTS2Q8WXX7 1259 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 BICD1Q96G01 975 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 RPGRIP1Q96KN7 1286 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 MMTAG2Q9BU76 263 aaKnown RBP13.81□□□□□ -0.2
C11orf54-210ENST00000531516 RUSC1Q9BVN2 902 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 APOL5Q9BWW9 433 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
C11orf54-210ENST00000531516 EPHX3Q9H6B9 360 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 SLC38A7Q9NVC3 462 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 ADAM28Q9UKQ2 775 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 GDAQ9Y2T3 454 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 HCN4Q9Y3Q4 1203 aa13.81□□□□□ -0.2
C11orf54-210ENST00000531516 TRAPPC3O43617 180 aa13.8□□□□□ -0.2
C11orf54-210ENST00000531516 GPR37L1O60883 481 aa13.8□□□□□ -0.2
C11orf54-210ENST00000531516 TBCAO75347 108 aaKnown RBP13.8□□□□□ -0.2
C11orf54-210ENST00000531516 FAM13AO94988 1023 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms