RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 VN1R3Q9BXE9 311 aa14.68□□□□□ -0.06
VPS28-211ENST00000530790 BACH2Q9BYV9 841 aa14.68□□□□□ -0.06
VPS28-211ENST00000530790 POLD4Q9HCU8 107 aa14.68□□□□□ -0.06
VPS28-211ENST00000530790 MARCH5Q9NX47 278 aa14.68□□□□□ -0.06
VPS28-211ENST00000530790 TTLL13PA6NNM8 815 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 CCDC169A6NNP5 214 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 PI4K2BG5E9Z4 385 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 DCXO43602 365 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 CLASP2O75122 1294 aaKnown RBP14.67□□□□□ -0.06
VPS28-211ENST00000530790 HIP1RO75146 1068 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 SSBP05455 408 aaKnown RBP eCLIP14.67□□□□□ -0.06
VPS28-211ENST00000530790 URODP06132 367 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 ALADP13716 330 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 DCAF4L1Q3SXM0 396 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 TMEM31Q5JXX7 168 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 HYIQ5T013 277 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 KCNK18Q7Z418 384 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 APBB1IPQ7Z5R6 666 aaPredicted RBP14.67□□□□□ -0.06
VPS28-211ENST00000530790 KCTD17Q8N5Z5 321 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 SUSD6Q92537 303 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 HERC2P3Q9BVR0 1158 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 TIPINQ9BVW5 301 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 APOL5Q9BWW9 433 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 EMILIN2Q9BXX0 1053 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 MRPL17Q9NRX2 175 aaKnown RBP14.67□□□□□ -0.06
VPS28-211ENST00000530790 DZANK1Q9NVP4 752 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 KLK14Q9P0G3 267 aa14.67□□□□□ -0.06
VPS28-211ENST00000530790 C5orf42Q9H799 3197 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 RECQL4O94761 1208 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 SOD2P04179 222 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 EDN1P05305 212 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 GUCY2CP25092 1073 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 NPTX2P47972 431 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 PEX3P56589 373 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 CBX2Q14781 532 aaPredicted RBP14.66□□□□□ -0.06
VPS28-211ENST00000530790 ATF7IP2Q5U623 682 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 RINT1Q6NUQ1 792 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 SYCE2Q6PIF2 218 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 CABP7Q86V35 215 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 PPFIBP1Q86W92 1011 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 AK8Q96MA6 479 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 PNMA5Q96PV4 448 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 PHF7Q9BWX1 381 aaPredicted RBP14.66□□□□□ -0.06
VPS28-211ENST00000530790 MIOSQ9NXC5 875 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 DAXXQ9UER7 740 aaPredicted RBP14.66□□□□□ -0.06
VPS28-211ENST00000530790 USP20Q9Y2K6 914 aa14.66□□□□□ -0.06
VPS28-211ENST00000530790 K7ERI5 159 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 SLC26A4O43511 780 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 COL9A1P20849 921 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 GLUD2P49448 558 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 ITIH3Q06033 890 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 MAPK7Q13164 816 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 EEF1DP3Q658K8 133 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 CES5AQ6NT32 575 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 C1orf186Q6ZWK4 172 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 DAW1Q8N136 415 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 GSTCDQ8NEC7 633 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 RASSF8Q8NHQ8 419 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 PLIN2Q99541 437 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 COLEC11Q9BWP8 271 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 S1PR5Q9H228 398 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 C17orf75Q9HAS0 396 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 KMT5AQ9NQR1 393 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 SNTG2Q9NY99 539 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 KCND2Q9NZV8 630 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 SSX2IPQ9Y2D8 614 aa14.65□□□□□ -0.06
VPS28-211ENST00000530790 FAM86C2PA6NEL3 165 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 F8W810 466 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 C2CD2LO14523 706 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 GPR37L1O60883 481 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 PLA2G4BP0C869 781 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 EPCAMP16422 314 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 UBA7P41226 1012 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 RAD51AP2Q09MP3 1159 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 TUSC3Q13454 348 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 SF3A1Q15459 793 aaKnown RBP14.64□□□□□ -0.07
VPS28-211ENST00000530790 TMEM119Q4V9L6 283 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 NT5DC1Q5TFE4 455 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 RNF135Q8IUD6 432 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 RNF168Q8IYW5 571 aaPredicted RBP14.64□□□□□ -0.07
VPS28-211ENST00000530790 SYT2Q8N9I0 419 aaPredicted RBP14.64□□□□□ -0.07
VPS28-211ENST00000530790 CALML4Q96GE6 196 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 RPGRIP1Q96KN7 1286 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 NECTIN4Q96NY8 510 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 MRPL4Q9BYD3 311 aaKnown RBP14.64□□□□□ -0.07
VPS28-211ENST00000530790 ADAM7Q9H2U9 754 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 TMEM134Q9H6X4 195 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 ARHGAP28Q9P2N2 729 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 MUTYHQ9UIF7 546 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 ADAM28Q9UKQ2 775 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 TNFSF13BQ9Y275 285 aa14.64□□□□□ -0.07
VPS28-211ENST00000530790 TDRD15B5MCY1 1934 aaKnown RBP14.63□□□□□ -0.07
VPS28-211ENST00000530790 LOC730098B7Z3J9 87 aa14.63□□□□□ -0.07
VPS28-211ENST00000530790 PTGESO14684 152 aa14.63□□□□□ -0.07
VPS28-211ENST00000530790 SLC16A4O15374 487 aa14.63□□□□□ -0.07
VPS28-211ENST00000530790 THP07101 528 aa14.63□□□□□ -0.07
VPS28-211ENST00000530790 ADH1AP07327 375 aa14.63□□□□□ -0.07
VPS28-211ENST00000530790 CNPP09543 421 aaKnown RBP14.63□□□□□ -0.07
VPS28-211ENST00000530790 PLS3P13797 630 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms