RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 UBXN11Q5T124 520 aa12.84□□□□□ -0.35
C9orf135-207ENST00000529446 ARMCX5Q6P1M9 558 aa12.84□□□□□ -0.35
C9orf135-207ENST00000529446 SLC39A4Q6P5W5 647 aa12.84□□□□□ -0.35
C9orf135-207ENST00000529446 ZNF365Q70YC5 407 aa12.84□□□□□ -0.35
C9orf135-207ENST00000529446 MRPL10Q7Z7H8 261 aaKnown RBP12.84□□□□□ -0.35
C9orf135-207ENST00000529446 HERVK_113Q902F9 699 aa12.84□□□□□ -0.35
C9orf135-207ENST00000529446 CDT1Q9H211 546 aa12.84□□□□□ -0.35
C9orf135-207ENST00000529446 ANKFY1Q9P2R3 1169 aa12.84□□□□□ -0.35
C9orf135-207ENST00000529446 RWDD2AQ9UIY3 292 aa12.84□□□□□ -0.35
C9orf135-207ENST00000529446 MAPK8IP1Q9UQF2 711 aa12.84□□□□□ -0.35
C9orf135-207ENST00000529446 SYCE3A1L190 88 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 ANKRD63C9JTQ0 380 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 OGTO15294 1046 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 HOXA2O43364 376 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 MGEA5O60502 916 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 NPTXRO95502 500 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 AMHP03971 560 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 STAG3L1P0CL83 205 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 ACRP10323 421 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 CD44P16070 742 aaKnown RBP12.83□□□□□ -0.36
C9orf135-207ENST00000529446 ADSSP30520 456 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 GRM5P41594 1212 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 FKBP3Q00688 224 aaKnown RBP12.83□□□□□ -0.36
C9orf135-207ENST00000529446 DPCR1Q3MIW9 517 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 EEF1DP3Q658K8 133 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 C16orf59Q7L2K0 433 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 RTN4RL1Q86UN2 441 aaPredicted RBP12.83□□□□□ -0.36
C9orf135-207ENST00000529446 NELFBQ8WX92 580 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 LINC01599Q8WXQ3 324 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 GDF15Q99988 308 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 MSTO1Q9BUK6 570 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 CCDC94Q9BW85 323 aaPredicted RBP12.83□□□□□ -0.36
C9orf135-207ENST00000529446 SEMA6BQ9H3T3 888 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 TMEM161AQ9NX61 479 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 AGO2Q9UKV8 859 aaKnown RBP12.83□□□□□ -0.36
C9orf135-207ENST00000529446 PCDHB2Q9Y5E7 798 aa12.83□□□□□ -0.36
C9orf135-207ENST00000529446 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.82□□□□□ -0.36
C9orf135-207ENST00000529446 H0YGN5 161 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 EXTL3O43909 919 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 FGFR1OPO95684 399 aaKnown RBP12.82□□□□□ -0.36
C9orf135-207ENST00000529446 NR3C1P04150 777 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 CLTAP09496 248 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 BMP8BP34820 402 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 EPHB4P54760 987 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 WDR5P61964 334 aaKnown RBP12.82□□□□□ -0.36
C9orf135-207ENST00000529446 KLHL10Q6JEL2 608 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 OTOP2Q7RTS6 562 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 ECHDC2Q86YB7 292 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 NPAS4Q8IUM7 802 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 ZC3H3Q8IXZ2 948 aaKnown RBP12.82□□□□□ -0.36
C9orf135-207ENST00000529446 XXYLT1Q8NBI6 393 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 PHOSPHO2Q8TCD6 241 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 ZBTB45Q96K62 511 aaPredicted RBP12.82□□□□□ -0.36
C9orf135-207ENST00000529446 FBXL18Q96ME1 805 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 TSPAN18Q96SJ8 248 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 SLC9A7Q96T83 725 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 BPIFA3Q9BQP9 254 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
C9orf135-207ENST00000529446 CBWD1Q9BRT8 395 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 FUCA2Q9BTY2 467 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 EIF2AQ9BY44 585 aaKnown RBP12.82□□□□□ -0.36
C9orf135-207ENST00000529446 TOPORSQ9NS56 1045 aaPredicted RBP12.82□□□□□ -0.36
C9orf135-207ENST00000529446 DMAC2Q9NW81 257 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 HSPBP1Q9NZL4 362 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 USP20Q9Y2K6 914 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 IPPQ9Y573 584 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.82□□□□□ -0.36
C9orf135-207ENST00000529446 SCN5AQ14524 2016 aa12.82□□□□□ -0.36
C9orf135-207ENST00000529446 CETN3O15182 167 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 MAPK13O15264 365 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 FAM189A1O60320 539 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 ITGA4P13612 1032 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 NR2F2P24468 414 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 YARSP54577 528 aaKnown RBP12.81□□□□□ -0.36
C9orf135-207ENST00000529446 ENPEPQ07075 957 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 TCTN1Q2MV58 587 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 RASIP1Q5U651 963 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 ANKRD40Q6AI12 368 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 TTI2Q6NXR4 508 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 ZBTB33Q86T24 672 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 ZNF598Q86UK7 904 aaKnown RBP12.81□□□□□ -0.36
C9orf135-207ENST00000529446 CDR2LQ86X02 465 aaPredicted RBP12.81□□□□□ -0.36
C9orf135-207ENST00000529446 CD302Q8IX05 232 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 GPD1LQ8N335 351 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 SMG8Q8ND04 991 aaKnown RBP12.81□□□□□ -0.36
C9orf135-207ENST00000529446 CEP63Q96MT8 703 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 MKNK1Q9BUB5 465 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 UBE2OQ9C0C9 1292 aaKnown RBP12.81□□□□□ -0.36
C9orf135-207ENST00000529446 LRFN2Q9ULH4 789 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 CTNND2Q9UQB3 1225 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 FRMD4BQ9Y2L6 1034 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 GIT1Q9Y2X7 761 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 PCDHB7Q9Y5E2 793 aa12.81□□□□□ -0.36
C9orf135-207ENST00000529446 ZNF233A6NK53 670 aa12.8□□□□□ -0.36
C9orf135-207ENST00000529446 ZBBXA8MT70 800 aa12.8□□□□□ -0.36
C9orf135-207ENST00000529446 TISP43B9A030 160 aa12.8□□□□□ -0.36
C9orf135-207ENST00000529446 INPPL1O15357 1258 aa12.8□□□□□ -0.36
C9orf135-207ENST00000529446 SLC16A3O15427 465 aaKnown RBP12.8□□□□□ -0.36
C9orf135-207ENST00000529446 EXOC3O60645 756 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms