RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 CHRNB1P11230 501 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 SFPQP23246 707 aaKnown RBP eCLIP15.23■□□□□ 0.03
SSRP1-203ENST00000526696 SREBF1P36956 1147 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 NOVA1P51513 510 aaKnown RBP15.23■□□□□ 0.03
SSRP1-203ENST00000526696 UGCGQ16739 394 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 WDR44Q5JSH3 913 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 ZNF746Q6NUN9 644 aaPredicted RBP15.23■□□□□ 0.03
SSRP1-203ENST00000526696 PRSS55Q6UWB4 352 aaPredicted RBP15.23■□□□□ 0.03
SSRP1-203ENST00000526696 NIPA1Q7RTP0 329 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 LONP2Q86WA8 852 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 PLA2G4DQ86XP0 818 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 CTCFLQ8NI51 663 aaPredicted RBP15.23■□□□□ 0.03
SSRP1-203ENST00000526696 FAM167AQ96KS9 214 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 CEP89Q96ST8 783 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 PCDHA10Q9Y5I2 948 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 ACACAQ13085 2346 aa15.23■□□□□ 0.03
SSRP1-203ENST00000526696 CYSRT1A8MQ03 144 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 DDAH1O94760 285 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 PSAPP07602 524 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 HNRNPA1P09651 372 aaKnown RBP eCLIP15.22■□□□□ 0.03
SSRP1-203ENST00000526696 ZNF252P-AS1Q0IIN9 211 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 GRM2Q14416 872 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 TARBP2Q15633 366 aaKnown RBP15.22■□□□□ 0.03
SSRP1-203ENST00000526696 PLA2G2CQ5R387 149 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 FUT10Q6P4F1 479 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 HEATR3Q7Z4Q2 680 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 KSR1Q8IVT5 923 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 DNASE1L2Q92874 299 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 SCNM1Q9BWG6 230 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.22■□□□□ 0.03
SSRP1-203ENST00000526696 DNMT3BQ9UBC3 853 aaKnown RBP15.22■□□□□ 0.03
SSRP1-203ENST00000526696 POLIQ9UNA4 740 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 EML5Q05BV3 1969 aa15.22■□□□□ 0.03
SSRP1-203ENST00000526696 VWA8A3KMH1 1905 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 CNTNAP2Q9UHC6 1331 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 MAN2B1O00754 1011 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 PAPSS2O95340 614 aaPredicted RBP15.21■□□□□ 0.03
SSRP1-203ENST00000526696 C8AP07357 584 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 CYP21A2P08686 494 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 RXRAP19793 462 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 FCARP24071 287 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 PRKCEQ02156 737 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 TRDNQ13061 729 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 SLC5A9Q2M3M2 681 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 USP41Q3LFD5 358 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 RTP2Q5QGT7 225 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 PPM1LQ5SGD2 360 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 WWC2Q6AWC2 1192 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 TCEAL6Q6IPX3 200 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 CEP68Q76N32 757 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 CATSPER4Q7RTX7 472 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 SMAP1Q8IYB5 467 aaPredicted RBP15.21■□□□□ 0.03
SSRP1-203ENST00000526696 GPR65Q8IYL9 337 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 SMG8Q8ND04 991 aaKnown RBP15.21■□□□□ 0.03
SSRP1-203ENST00000526696 CRYGNQ8WXF5 182 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 FAM3CQ92520 227 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 TCEAL3Q969E4 200 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 MCRS1Q96EZ8 462 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 CLSTN3Q9BQT9 956 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 LZTS2Q9BRK4 669 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 RIC8AQ9NPQ8 531 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 AGPAT5Q9NUQ2 364 aa15.21■□□□□ 0.03
SSRP1-203ENST00000526696 APC2O95996 2303 aa15.21■□□□□ 0.02
SSRP1-203ENST00000526696 IGKV6-21A0A0C4DH24 114 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 TMEM150BA6NC51 233 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 ADAM12O43184 909 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 EPN2O95208 641 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 HOXA11P31270 313 aaPredicted RBP15.2■□□□□ 0.02
SSRP1-203ENST00000526696 ZNF76P36508 570 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 RAP1GAPP47736 663 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 Q6ZS52 159 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 SPEM1Q8N4L4 309 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 CCDC82Q8N4S0 544 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 RABGGTAQ92696 567 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 ZFP42Q96MM3 310 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 IFT122Q9HBG6 1241 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 DIAPH3Q9NSV4 1193 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 RBM12Q9NTZ6 932 aaKnown RBP15.2■□□□□ 0.02
SSRP1-203ENST00000526696 RCAN3Q9UKA8 241 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 KCNH3Q9ULD8 1083 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 PDCD11Q14690 1871 aaKnown RBP15.2■□□□□ 0.02
SSRP1-203ENST00000526696 ATG2BQ96BY7 2078 aa15.2■□□□□ 0.02
SSRP1-203ENST00000526696 ARL5CA6NH57 179 aa15.19■□□□□ 0.02
SSRP1-203ENST00000526696 FOSP01100 380 aaPredicted RBP15.19■□□□□ 0.02
SSRP1-203ENST00000526696 HOXA9P31269 272 aa15.19■□□□□ 0.02
SSRP1-203ENST00000526696 RBM25P49756 843 aaKnown RBP15.19■□□□□ 0.02
SSRP1-203ENST00000526696 CLK2P49760 499 aaKnown RBP15.19■□□□□ 0.02
SSRP1-203ENST00000526696 SCNN1GP51170 649 aa15.19■□□□□ 0.02
SSRP1-203ENST00000526696 PABPC1LQ4VXU2 614 aaKnown RBP15.19■□□□□ 0.02
SSRP1-203ENST00000526696 RNF43Q68DV7 783 aa15.19■□□□□ 0.02
SSRP1-203ENST00000526696 ZNF410Q86VK4 478 aa15.19■□□□□ 0.02
SSRP1-203ENST00000526696 RAB11FIP4Q86YS3 637 aa15.19■□□□□ 0.02
SSRP1-203ENST00000526696 MAP4K3Q8IVH8 894 aa15.19■□□□□ 0.02
SSRP1-203ENST00000526696 ELSPBP1Q96BH3 223 aa15.19■□□□□ 0.02
SSRP1-203ENST00000526696 GAD1Q99259 594 aa15.19■□□□□ 0.02
SSRP1-203ENST00000526696 SH2D3AQ9BRG2 576 aa15.19■□□□□ 0.02
SSRP1-203ENST00000526696 ZNF577Q9BSK1 485 aa15.19■□□□□ 0.02
SSRP1-203ENST00000526696 NRBP2Q9NSY0 501 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms