RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 STAMQ92783 540 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 HAS1Q92839 578 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 CCDC51Q96ER9 411 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 ZFP42Q96MM3 310 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 GBP4Q96PP9 640 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 RPS6KC1Q96S38 1066 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 NXF3Q9H4D5 531 aaKnown RBP13.05□□□□□ -0.32
CAPN1-204ENST00000526468 ZSWIM4Q9H7M6 989 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 UBN1Q9NPG3 1134 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 GJB4Q9NTQ9 266 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 SSX2IPQ9Y2D8 614 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 HES2Q9Y543 173 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 TCHHQ07283 1943 aa13.05□□□□□ -0.32
CAPN1-204ENST00000526468 ARL5CA6NH57 179 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 PROB1E7EW31 1015 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 F8W810 466 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 TEX28O15482 410 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 ALDH2P05091 517 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 AOC1P19801 751 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 NBL1P41271 181 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 CLCN5P51795 746 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 SPIRE1Q08AE8 756 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 CAPSQ13938 189 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 HSP90AA2PQ14568 343 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-204ENST00000526468 GLYCTKQ8IVS8 523 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 TPH2Q8IWU9 490 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 COLGALT2Q8IYK4 626 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 HACE1Q8IYU2 909 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 ASAP3Q8TDY4 903 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 SMG7Q92540 1137 aaKnown RBP13.04□□□□□ -0.32
CAPN1-204ENST00000526468 B3GALT6Q96L58 329 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 TM6SF1Q9BZW5 370 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 KCNK12Q9HB15 430 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 BRMS1Q9HCU9 246 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 XPNPEP1Q9NQW7 623 aa13.04□□□□□ -0.32
CAPN1-204ENST00000526468 ZNF638Q14966 1978 aaKnown RBP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 ASAP2O43150 1006 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 EPB41L2O43491 1005 aaKnown RBP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 NARSO43776 548 aaKnown RBP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 NR1I2O75469 434 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 RFPL2O75678 378 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 BAG4O95429 457 aaKnown RBP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 CFHP08603 1231 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 AXLP30530 894 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 KRT2P35908 639 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 PTENP60484 403 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 MBTD1Q05BQ5 628 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 DSC1Q08554 894 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 NCBP1Q09161 790 aaKnown RBP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 MXD4Q14582 209 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 PCBP1Q15365 356 aaKnown RBP eCLIP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 GET4Q7L5D6 327 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 CCDC105Q8IYK2 499 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 CMASQ8NFW8 434 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 NKD2Q969F2 451 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 TRIM44Q96DX7 344 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 PKNOX2Q96KN3 472 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 CSRNP2Q9H175 543 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 POLR3FQ9H1D9 316 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-204ENST00000526468 PIDD1Q9HB75 910 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 IGSF9Q9P2J2 1179 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 DPP7Q9UHL4 492 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 WDR87Q6ZQQ6 2873 aa13.03□□□□□ -0.32
CAPN1-204ENST00000526468 SPTBN2O15020 2390 aa13.02□□□□□ -0.32
CAPN1-204ENST00000526468 CCDC195A0A1B0GUA6 201 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 ZBTB39O15060 712 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 B4GALT5O43286 388 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 USO1O60763 962 aaKnown RBP13.02□□□□□ -0.33
CAPN1-204ENST00000526468 LILRB3O75022 631 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 N4BP1O75113 896 aaKnown RBP13.02□□□□□ -0.33
CAPN1-204ENST00000526468 NPTXRO95502 500 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 SPATA31D3P0C874 917 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 ARF4P18085 180 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-204ENST00000526468 FOSBP53539 338 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 GRIK3Q13003 919 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 NR5A1Q13285 461 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 CALCRLQ16602 461 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 EARS2Q5JPH6 523 aaKnown RBP13.02□□□□□ -0.33
CAPN1-204ENST00000526468 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 SPATA31D4Q6ZUB0 917 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 TAS1R1Q7RTX1 841 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 RNF168Q8IYW5 571 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-204ENST00000526468 WASF1Q92558 559 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 EIF2AK1Q9BQI3 630 aaKnown RBP13.02□□□□□ -0.33
CAPN1-204ENST00000526468 RNF39Q9H2S5 420 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 WDR6Q9NNW5 1121 aaKnown RBP13.02□□□□□ -0.33
CAPN1-204ENST00000526468 ORC3Q9UBD5 711 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-204ENST00000526468 CA14Q9ULX7 337 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 ZMYM2Q9UBW7 1377 aa13.02□□□□□ -0.33
CAPN1-204ENST00000526468 KIF26AQ9ULI4 1882 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-204ENST00000526468 DCHS1Q96JQ0 3298 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 F5P12259 2224 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 SPAG17Q6Q759 2223 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 LRRIQ4A6NIV6 560 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 GOLGA6L22H0YM25 854 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 STK25O00506 426 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 NEMFO60524 1076 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 PFKFB2O60825 505 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 DGAT1O75907 488 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 NPR3P17342 541 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms