RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 RFWD2Q8NHY2 731 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 FAM162AQ96A26 154 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 SPON2Q9BUD6 331 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 SPATA16Q9BXB7 569 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 MRPL1Q9BYD6 325 aaKnown RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 SLC9A2Q9UBY0 812 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 ASMTLO95671 621 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 EIF2S1P05198 315 aaKnown RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 PNMA6AP0CW24 399 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 HOXA13P31271 388 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 HSPA9P38646 679 aaKnown RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 SPDYAQ5MJ70 313 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 ICE2Q659A1 982 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 HORMAD1Q86X24 394 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 DMAP1Q9NPF5 467 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 NPM3O75607 178 aaKnown RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 KCNQ4P56696 695 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 LRRC74AQ0VAA2 488 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 DNAL1Q4LDG9 190 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 PRUNE1Q86TP1 453 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 ARMC2Q8NEN0 867 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 C11orf70Q9BRQ4 267 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 ZNF302Q9NR11 478 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 C6orf203Q9P0P8 240 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 FEM1BQ9UK73 627 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 GDAQ9Y2T3 454 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 UNC13AQ9UPW8 1703 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 RPAP1Q9BWH6 1393 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 LRRC53A6NM62 1247 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 F5H423 210 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 CENPAP49450 140 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 NCALDP61601 193 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 RINLQ6ZS11 566 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 SYDE1Q6ZW31 735 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 CDR2LQ86X02 465 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 FAM213AQ9BRX8 229 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 PARVAQ9NVD7 372 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 GEMIN8Q9NWZ8 242 aaKnown RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 TJP2Q9UDY2 1190 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 PCSK1NQ9UHG2 260 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 FBXL5Q9UKA1 691 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 PCDHA6Q9UN73 950 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 PCDHA8Q9Y5H6 950 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 AKAP10O43572 662 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 CYTH3O43739 400 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 APOA4P06727 396 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 ADORA2BP29275 332 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 ALDH18A1P54886 795 aaKnown RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 HPCAP84074 193 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 CDK17Q00537 523 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 TP53BP2Q13625 1128 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 RASGRF1Q13972 1273 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 STAT4Q14765 748 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 DDX53Q86TM3 631 aaKnown RBP9.95□□□□□ -0.82
CTNND1-213ENST00000526357 RAD54LQ92698 747 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 C19orf60Q96EN9 201 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 CCDC134Q9H6E4 229 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 NSMCE4AQ9NXX6 385 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 HOXC10Q9NYD6 342 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 PCDHB6Q9Y5E3 794 aa9.95□□□□□ -0.82
CTNND1-213ENST00000526357 SFI1A8K8P3 1242 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 RASSF9O75901 435 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 MOCS2O96007 188 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-213ENST00000526357 HSD17B4P51659 736 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 VAMP7P51809 220 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 NLRP11P59045 1033 aaKnown RBP9.94□□□□□ -0.82
CTNND1-213ENST00000526357 DHX34Q14147 1143 aaKnown RBP9.94□□□□□ -0.82
CTNND1-213ENST00000526357 ATP6V1G3Q96LB4 118 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 INTS2Q9H0H0 1204 aaKnown RBP9.94□□□□□ -0.82
CTNND1-213ENST00000526357 DHX35Q9H5Z1 703 aaKnown RBP9.94□□□□□ -0.82
CTNND1-213ENST00000526357 DBNDD1Q9H9R9 158 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 KRCC1Q9NPI7 259 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-213ENST00000526357 STAP2Q9UGK3 403 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 UGGT2Q9NYU1 1516 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 GPATCH8Q9UKJ3 1502 aaKnown RBP9.94□□□□□ -0.82
CTNND1-213ENST00000526357 MAP3K13O43283 966 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 KIF1CO43896 1103 aaKnown RBP9.94□□□□□ -0.82
CTNND1-213ENST00000526357 SFNP31947 248 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 CRKLP46109 303 aaKnown RBP9.94□□□□□ -0.82
CTNND1-213ENST00000526357 PSMD7P51665 324 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 ST8SIA6P61647 398 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 PADI6Q6TGC4 694 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 TMEM179Q6ZVK1 233 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 ZNF507Q8TCN5 953 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 DIS3LQ8TF46 1054 aaKnown RBP9.94□□□□□ -0.82
CTNND1-213ENST00000526357 CYGBQ8WWM9 190 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 RUBCNQ92622 972 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 SMARCAD1Q9H4L7 1026 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 TAF1DQ9H5J8 278 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-213ENST00000526357 SYNDIG1Q9H7V2 258 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 ABHD10Q9NUJ1 306 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 UHRF1BP1Q6BDS2 1440 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 NPC1L1Q9UHC9 1359 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 USP17L3A6NCW0 530 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 USP17L4A6NCW7 530 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 MYO1CO00159 1063 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 ALDH1A1P00352 501 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 PPP3CCP48454 512 aa9.94□□□□□ -0.82
CTNND1-213ENST00000526357 ST13P50502 369 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms