RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 TROAPQ12815 778 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 CDKL2Q92772 493 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 RPGRIP1Q96KN7 1286 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 SENP6Q9GZR1 1112 aaPredicted RBP18.2■□□□□ 0.5
BEST1-203ENST00000524877 SNX9Q9Y5X1 595 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 FRMD3A2A2Y4 597 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 MUTP22033 750 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 AGO4Q9HCK5 861 aaKnown RBP18.19■□□□□ 0.5
BEST1-203ENST00000524877 PCSK1P29120 753 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 PAN2Q504Q3 1202 aaKnown RBP18.19■□□□□ 0.5
BEST1-203ENST00000524877 CACYBPQ9HB71 228 aaKnown RBP18.19■□□□□ 0.5
BEST1-203ENST00000524877 DPP7Q9UHL4 492 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 ODC1P11926 461 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 PPARGP37231 505 aaPredicted RBP18.19■□□□□ 0.5
BEST1-203ENST00000524877 EVCP57679 992 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 GDAP1Q8TB36 358 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 PDCD2LQ9BRP1 358 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 ZWILCHQ9H900 591 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 PFDN4Q9NQP4 134 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 FBXO2Q9UK22 296 aaPredicted RBP18.19■□□□□ 0.5
BEST1-203ENST00000524877 PASKQ96RG2 1323 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 CLTAP09496 248 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 TCP1P17987 556 aaKnown RBP18.19■□□□□ 0.5
BEST1-203ENST00000524877 Q4G0T1 1027 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 KIAA1755Q5JYT7 1200 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 FRMD5Q7Z6J6 570 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 DESI2Q9BSY9 194 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 WDR18Q9BV38 432 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 GMNNO75496 209 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 ZBTB48P10074 688 aaPredicted RBP18.19■□□□□ 0.5
BEST1-203ENST00000524877 SDC4P31431 198 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 DYNLT1P63172 113 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 MAP2K5Q13163 448 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 KRT31Q15323 416 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 PTGISQ16647 500 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 CHAMP1Q96JM3 812 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 SMC6Q96SB8 1091 aa18.19■□□□□ 0.5
BEST1-203ENST00000524877 EMSYQ7Z589 1322 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 LRRD1A4D1F6 860 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 CYP4F22Q6NT55 531 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 PPP2R2CQ9Y2T4 447 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 MAD1L1Q9Y6D9 718 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 NEMP1O14524 444 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 ACOT2P49753 483 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 LY6KQ17RY6 165 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 PASD1Q8IV76 773 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 CALR3Q96L12 384 aaKnown RBP18.18■□□□□ 0.5
BEST1-203ENST00000524877 PLCB1Q9NQ66 1216 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 DYRK4Q9NR20 520 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 SATB2Q9UPW6 733 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 SGSM1Q2NKQ1 1148 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 ERCC6LQ2NKX8 1250 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 STMN2Q93045 179 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 CAPN7Q9Y6W3 813 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 MYOM1P52179 1685 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 TRIM49BA6NDI0 452 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 CASQ2O14958 399 aaPredicted RBP18.18■□□□□ 0.5
BEST1-203ENST00000524877 OAS2P29728 719 aaKnown RBP18.18■□□□□ 0.5
BEST1-203ENST00000524877 MGAT5BQ3V5L5 792 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 TRIM72Q6ZMU5 477 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 TRPV6Q9H1D0 765 aa18.18■□□□□ 0.5
BEST1-203ENST00000524877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.18■□□□□ 0.5
BEST1-203ENST00000524877 CA4P22748 312 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 PSEN2P49810 448 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 CDK17Q00537 523 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 KCNB1Q14721 858 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 GRIK4Q16099 956 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 GPR142Q7Z601 462 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 TSC1Q92574 1164 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 VCX3BQ9H321 246 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 H3BRB1 525 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 EXTL3O43909 919 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 RAB27AP51159 221 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 WDR72Q3MJ13 1102 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 MOB2Q70IA6 237 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 TMEM199Q8N511 208 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 TAB3Q8N5C8 712 aaPredicted RBP18.17■□□□□ 0.5
BEST1-203ENST00000524877 TUT1Q9H6E5 874 aaKnown RBP18.17■□□□□ 0.5
BEST1-203ENST00000524877 ONECUT3O60422 494 aaPredicted RBP18.17■□□□□ 0.5
BEST1-203ENST00000524877 URODP06132 367 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 TSTA3Q13630 321 aaPredicted RBP18.17■□□□□ 0.5
BEST1-203ENST00000524877 NFRKBQ6P4R8 1299 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 GLYCTKQ8IVS8 523 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 RHOT2Q8IXI1 618 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 CCDC170Q8IYT3 715 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 UBQLN1Q9UMX0 589 aaKnown RBP18.17■□□□□ 0.5
BEST1-203ENST00000524877 RRP15Q9Y3B9 282 aaKnown RBP18.17■□□□□ 0.5
BEST1-203ENST00000524877 AHDC1Q5TGY3 1603 aaPredicted RBP18.17■□□□□ 0.5
BEST1-203ENST00000524877 EIF3DO15371 548 aaKnown RBP eCLIP18.17■□□□□ 0.5
BEST1-203ENST00000524877 CASP1P29466 404 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 E2F4Q16254 413 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 DNAAF3Q8N9W5 541 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 DDX23Q9BUQ8 820 aaKnown RBP18.17■□□□□ 0.5
BEST1-203ENST00000524877 TJP2Q9UDY2 1190 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 MSRAQ9UJ68 235 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 FAM205CA6NFA0 338 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 PRR29P0C7W0 189 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 EIF4A3P38919 411 aaKnown RBP18.17■□□□□ 0.5
BEST1-203ENST00000524877 KRT33BQ14525 404 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms