RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 OR7D4Q8NG98 312 aa7.28□□□□□ -1.24
CPNE3-207ENST00000523588 NRG4Q8WWG1 115 aa7.28□□□□□ -1.24
CPNE3-207ENST00000523588 MIEF2Q96C03 454 aa7.28□□□□□ -1.24
CPNE3-207ENST00000523588 CDC5LQ99459 802 aaKnown RBP7.28□□□□□ -1.24
CPNE3-207ENST00000523588 DNM3Q9UQ16 869 aa7.28□□□□□ -1.24
CPNE3-207ENST00000523588 CAPN14A8MX76 684 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 MUSKO15146 869 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 ECHS1P30084 290 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 SLC6A9P48067 706 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 APBA1Q02410 837 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 PRKD1Q15139 912 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-207ENST00000523588 PRAMEF14Q5SWL7 426 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 GJC2Q5T442 439 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-207ENST00000523588 PALM2Q8IXS6 379 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 ANKRD13AQ8IZ07 590 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 TRMT2AQ8IZ69 625 aaKnown RBP7.27□□□□□ -1.25
CPNE3-207ENST00000523588 ANKRD35Q8N283 1001 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.27□□□□□ -1.25
CPNE3-207ENST00000523588 REPS2Q8NFH8 660 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 MDM1Q8TC05 714 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 DPF2Q92785 391 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 CHMP4CQ96CF2 233 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 CDK5RAP1Q96SZ6 601 aaKnown RBP7.27□□□□□ -1.25
CPNE3-207ENST00000523588 LSM14BQ9BX40 385 aaKnown RBP7.27□□□□□ -1.25
CPNE3-207ENST00000523588 SIK3Q9Y2K2 1263 aa7.27□□□□□ -1.25
CPNE3-207ENST00000523588 C1QTNF3-AMACRE9PGA6 284 aa7.26□□□□□ -1.25
CPNE3-207ENST00000523588 PLSCR1O15162 318 aa7.26□□□□□ -1.25
CPNE3-207ENST00000523588 ZRANB2O95218 330 aaKnown RBP eCLIP7.26□□□□□ -1.25
CPNE3-207ENST00000523588 ADRB1P08588 477 aa7.26□□□□□ -1.25
CPNE3-207ENST00000523588 HIBADHP31937 336 aaKnown RBP7.26□□□□□ -1.25
CPNE3-207ENST00000523588 SREBF1P36956 1147 aa7.26□□□□□ -1.25
CPNE3-207ENST00000523588 NEK2P51955 445 aa7.26□□□□□ -1.25
CPNE3-207ENST00000523588 MFSD14BQ5SR56 506 aa7.26□□□□□ -1.25
CPNE3-207ENST00000523588 EFCAB2Q5VUJ9 269 aa7.26□□□□□ -1.25
CPNE3-207ENST00000523588 C1QL3Q5VWW1 255 aa7.26□□□□□ -1.25
CPNE3-207ENST00000523588 APBB1IPQ7Z5R6 666 aaPredicted RBP7.26□□□□□ -1.25
CPNE3-207ENST00000523588 MDGA1Q8NFP4 955 aa7.26□□□□□ -1.25
CPNE3-207ENST00000523588 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.26□□□□□ -1.25
CPNE3-207ENST00000523588 CEP95Q96GE4 821 aa7.26□□□□□ -1.25
CPNE3-207ENST00000523588 ATRNL1Q5VV63 1379 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 PPM1GO15355 546 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-207ENST00000523588 ALDH1L1O75891 902 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 CCND1P24385 295 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 EDNRBP24530 442 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 RECQLP46063 649 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-207ENST00000523588 RABGGTBP53611 331 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 Q6ZRM9 215 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 DOK3Q7L591 496 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 GPRIN1Q7Z2K8 1008 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 THEMISQ8N1K5 641 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-207ENST00000523588 PQLC1Q8N2U9 271 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 ST8SIA2Q92186 375 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 PDCD2LQ9BRP1 358 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 KCNH6Q9H252 994 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 SERPINB13Q9UIV8 391 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 INTUQ9ULD6 942 aa7.25□□□□□ -1.25
CPNE3-207ENST00000523588 FAM171A2A8MVW0 826 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 MFAP3LO75121 409 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 IPO13O94829 963 aaKnown RBP7.24□□□□□ -1.25
CPNE3-207ENST00000523588 ENDOD1O94919 500 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 GNAT2P19087 354 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 GUCY1A2P33402 732 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 SCNN1GP51170 649 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 TTF1Q15361 905 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-207ENST00000523588 CSRP2Q16527 193 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 SPDYAQ5MJ70 313 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 ANKS6Q68DC2 871 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 HTR3DQ70Z44 454 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 PDZD4Q76G19 769 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-207ENST00000523588 ZNF572Q7Z3I7 529 aaPredicted RBP7.24□□□□□ -1.25
CPNE3-207ENST00000523588 ZBTB46Q86UZ6 589 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 XYLT1Q86Y38 959 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 FBXO18Q8NFZ0 1043 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 COA7Q96BR5 231 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 CPEB1Q9BZB8 566 aaKnown RBP7.24□□□□□ -1.25
CPNE3-207ENST00000523588 LIMCH1Q9UPQ0 1083 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 IPPQ9Y573 584 aa7.24□□□□□ -1.25
CPNE3-207ENST00000523588 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 KLRG2A4D1S0 409 aaPredicted RBP7.23□□□□□ -1.25
CPNE3-207ENST00000523588 CYP27B1O15528 508 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 SNUPNO95149 360 aaKnown RBP7.23□□□□□ -1.25
CPNE3-207ENST00000523588 ALOX15P16050 662 aaPredicted RBP7.23□□□□□ -1.25
CPNE3-207ENST00000523588 ACRV1P26436 265 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 PTPN7P35236 360 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 FLT3LGP49771 235 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 ADKP55263 362 aaKnown RBP7.23□□□□□ -1.25
CPNE3-207ENST00000523588 PER3P56645 1201 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 KIF23Q02241 960 aaPredicted RBP7.23□□□□□ -1.25
CPNE3-207ENST00000523588 MCL1Q07820 350 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 FAM47AQ5JRC9 791 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 TMEM240Q5SV17 173 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 FAM83AQ86UY5 434 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 GSPT2Q8IYD1 628 aaKnown RBP7.23□□□□□ -1.25
CPNE3-207ENST00000523588 CMTR2Q8IYT2 770 aaKnown RBP7.23□□□□□ -1.25
CPNE3-207ENST00000523588 MB21D1Q8N884 522 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 OR52N2Q8NGI0 321 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 HOOK2Q96ED9 719 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 CEP89Q96ST8 783 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 CPPED1Q9BRF8 314 aaPredicted RBP7.23□□□□□ -1.25
CPNE3-207ENST00000523588 EPC1Q9H2F5 836 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms