RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 TBX20Q9UMR3 447 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 RARBP10826 455 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 FAM102AQ5T9C2 384 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 ANKRD20A3Q5VUR7 823 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 RNF139Q8WU17 664 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 RBM41Q96IZ5 413 aaKnown RBP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 ERAP1Q9NZ08 941 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 HEY1Q9Y5J3 304 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 ATRNO75882 1429 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 KIAA0391O15091 583 aaKnown RBP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 TJP3O95049 919 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 KLRC1P26715 233 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 TMED2Q15363 201 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 ZKSCAN8Q15776 578 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 SHROOM1Q2M3G4 852 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 MAP1SQ66K74 1059 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 SCN4BQ8IWT1 228 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 CHORDC1Q9UHD1 332 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 PLAGL2Q9UPG8 496 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 SNX9Q9Y5X1 595 aa13.95□□□□□ -0.18
PCDHGB1-201ENST00000523390 ARHGEF37A1IGU5 675 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 PIK3R2O00459 728 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 CRCPO75575 148 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 PSMC4P43686 418 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 SARSP49591 514 aaKnown RBP13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 SLMAPQ14BN4 828 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 MAP7D1Q3KQU3 841 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 GLE1Q53GS7 698 aaKnown RBP13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 FBXO16Q8IX29 292 aaPredicted RBP13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 BLOC1S4Q9NUP1 217 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 VWA5AO00534 786 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 HBP1O60381 514 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 RTN2O75298 545 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 SDC4P31431 198 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 CCT5P48643 541 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 AP3M2P53677 418 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 SOX10P56693 466 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 FKBP1CQ5VVH2 108 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 RBBP8NLQ8NC74 664 aaPredicted RBP13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 RNPC3Q96LT9 517 aaKnown RBP13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 RASGRF2O14827 1237 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 MAGEB2O15479 319 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 CPP00450 1065 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 NPTX2P47972 431 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 PDE1BQ01064 536 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 IER5Q5VY09 327 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 PCNX4Q63HM2 1172 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 TRIM72Q6ZMU5 477 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 SLC35G2Q8TBE7 412 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 RILPQ96NA2 401 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 AMACRQ9UHK6 382 aa13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 DIS3Q9Y2L1 958 aaKnown RBP13.94□□□□□ -0.18
PCDHGB1-201ENST00000523390 TMEM150BA6NC51 233 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 EML1O00423 815 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 AKAP3O75969 853 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 GTF2A1P52655 376 aaPredicted RBP13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 VSNL1P62760 191 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 ATF7IP2Q5U623 682 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 GKAP1Q5VSY0 366 aaPredicted RBP13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 LRRN4CLQ8ND94 238 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 C1orf54Q8WWF1 131 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 MRIQ9BWK5 157 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 A0A1W2PQJ5 194 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 ANKRD65E5RJM6 399 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 PODXLO00592 558 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 ZBTB39O15060 712 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 DSG3P32926 999 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 CLCN3P51790 818 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 NOP14P78316 857 aaKnown RBP13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 ATP11AP98196 1134 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 TTC31Q49AM3 519 aaPredicted RBP13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 PDIK1LQ8N165 341 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 AGO4Q9HCK5 861 aaKnown RBP13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 TMEM8AQ9HCN3 771 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 HAUS2Q9NVX0 235 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 TCHHQ07283 1943 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 A0A087X0T9 212 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 EXOC1LA0A1B0GW35 172 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 WNT7AO00755 349 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 ATMINO43313 823 aaPredicted RBP13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 FAM228BP0C875 321 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 CYP2C9P11712 490 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 NAB2Q15742 525 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 NYAP1Q6ZVC0 841 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 REXO1L1PQ8IX06 675 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 CDKL2Q92772 493 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 MKL1Q969V6 931 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 ASNSD1Q9NWL6 643 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 GIPC1O14908 333 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 SUPT20HL2P0C7V6 817 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 TROVE2P10155 538 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 PGM5Q15124 567 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 TRIM59Q8IWR1 403 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 LRRC1Q9BTT6 524 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 SPATC1LQ9H0A9 340 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 PLAAQ9Y263 795 aa13.93□□□□□ -0.18
PCDHGB1-201ENST00000523390 LMO7Q8WWI1 1683 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 PI4K2BG5E9Z4 385 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 WEE2P0C1S8 567 aa13.92□□□□□ -0.18
PCDHGB1-201ENST00000523390 NLRP11P59045 1033 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms