RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 AJAP1Q9UKB5 411 aaPredicted RBP16.4■□□□□ 0.22
CSGALNACT1-211ENST00000522854 FRMPD3Q5JV73 1810 aa16.39■□□□□ 0.22
CSGALNACT1-211ENST00000522854 SOWAHDA6NJG2 315 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 LRRIQ3A6PVS8 624 aaPredicted RBP16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 MSNP26038 577 aaKnown RBP16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PON1P27169 355 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 C1QTNF8P60827 252 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 CYP24A1Q07973 514 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ATF7IP2Q5U623 682 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 SCARA3Q6AZY7 606 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 DPY19L2P1Q6NXN4 242 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TMEM192Q8IY95 271 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 SLAIN1Q8ND83 568 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PDE11AQ9HCR9 933 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 GTF2IRD1Q9UHL9 959 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 CAPN11Q9UMQ6 739 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PTPRJQ12913 1337 aa16.39■□□□□ 0.21
CSGALNACT1-211ENST00000522854 SMIM35A0A1B0GVV1 85 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 USP27XA6NNY8 438 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 EXTL3O43909 919 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 FAM189A1O60320 539 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TOM1L1O75674 476 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ARF4P18085 180 aaPredicted RBP16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 HOXC8P31273 242 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 EXOC3L4Q17RC7 722 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ZPBP2Q6X784 338 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 THNSL1Q8IYQ7 743 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TMEM130Q8N3G9 435 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 KIAA1524Q8TCG1 905 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PARD3BQ8TEW8 1205 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 VTI1AQ96AJ9 217 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 BAG1Q99933 345 aaPredicted RBP16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 HMX1Q9NP08 348 aaPredicted RBP16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 WBP1LQ9NX94 342 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 LUC7L2Q9Y383 392 aaKnown RBP16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 POLR2FP61218 127 aaKnown RBP16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 MTFR1Q15390 333 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ZNF568Q3ZCX4 644 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TSHZ1Q6ZSZ6 1077 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 CNGA4Q8IV77 575 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 NEK11Q8NG66 645 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 MFSD14AQ96MC6 490 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 CHP1Q99653 195 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 NFKBIZQ9BYH8 718 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TMEM117Q9H0C3 514 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 UNC93B1Q9H1C4 597 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PTPRHQ9HD43 1115 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ZNF233A6NK53 670 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ZEB2O60315 1214 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TSPAN1O60635 241 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ABCD1P33897 745 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 NKX3-2P78367 333 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 MYL7Q01449 175 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 WDR59Q6PJI9 974 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ZNF516Q92618 1163 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 RBAKQ9NYW8 714 aaPredicted RBP16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 FHOD1Q9Y613 1164 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 LRRC53A6NM62 1247 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 KPNA6O60684 536 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TPM1P09493 284 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 CTSHP09668 335 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PNMA6AP0CW24 399 aaPredicted RBP16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PROZP22891 400 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ACLYP53396 1101 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PPP2R3AQ06190 1150 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TRIM14Q14142 442 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 SLFN12LQ6IEE8 588 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TRIM65Q6PJ69 517 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 GBP6Q6ZN66 633 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 RRAGAQ7L523 313 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 BAP1Q92560 729 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 FAM212AQ96EL1 285 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PANX2Q96RD6 677 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 OSBPL7Q9BZF2 842 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 CDT1Q9H211 546 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 GANQ9H2C0 597 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PDZD7Q9H5P4 517 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TRMT13Q9NUP7 481 aaKnown RBP16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PRMT7Q9NVM4 692 aaPredicted RBP16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PTPN22Q9Y2R2 807 aa16.37■□□□□ 0.21
CSGALNACT1-211ENST00000522854 PLEKP08567 350 aaPredicted RBP16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 CST5P28325 142 aaPredicted RBP16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 POU5F1BQ06416 359 aa16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 MCL1Q07820 350 aa16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 NOLC1Q14978 699 aaKnown RBP eCLIP16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 MPZL3Q6UWV2 235 aa16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 RAD9BQ6WBX8 426 aa16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TOGARAM2Q6ZUX3 1019 aa16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 RNF180Q86T96 592 aa16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 IFNLR1Q8IU57 520 aaPredicted RBP16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 DESI2Q9BSY9 194 aa16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 TRMT1Q9NXH9 659 aaKnown RBP16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 CNTNAP2Q9UHC6 1331 aa16.36■□□□□ 0.21
CSGALNACT1-211ENST00000522854 MAPK13O15264 365 aa16.35■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ERLIN2O94905 339 aa16.35■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ANK1P16157 1881 aa16.35■□□□□ 0.21
CSGALNACT1-211ENST00000522854 SCP2P22307 547 aa16.35■□□□□ 0.21
CSGALNACT1-211ENST00000522854 ARHGEF6Q15052 776 aa16.35■□□□□ 0.21
CSGALNACT1-211ENST00000522854 KLHDC7AQ5VTJ3 777 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms