RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 B4GALNT3Q6L9W6 998 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 XRRA1Q6P2D8 792 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 CASC1Q6TDU7 716 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 ZNF438Q7Z4V0 828 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 DTX1Q86Y01 620 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 NPAS4Q8IUM7 802 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 THNSL1Q8IYQ7 743 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 CMTR2Q8IYT2 770 aaKnown RBP7.13□□□□□ -1.27
PABPC1-220ENST00000522658 C1orf127Q8N9H9 656 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 RUFY2Q8WXA3 655 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 EDAQ92838 391 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 ATOH1Q92858 354 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-220ENST00000522658 P2RX5Q93086 422 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 RRP36Q96EU6 259 aaKnown RBP7.13□□□□□ -1.27
PABPC1-220ENST00000522658 NEK1Q96PY6 1258 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 PIGSQ96S52 555 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 GPR20Q99678 358 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 FAM49AQ9H0Q0 323 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-220ENST00000522658 SMARCAD1Q9H4L7 1026 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 ALG13Q9NP73 1137 aaKnown RBP7.13□□□□□ -1.27
PABPC1-220ENST00000522658 ZSWIM5Q9P217 1185 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 CDY2AQ9Y6F7 541 aa7.13□□□□□ -1.27
PABPC1-220ENST00000522658 MUC6Q6W4X9 2439 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 MYH7BA7E2Y1 1941 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 RRN3P2A6NIE6 340 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 PAX4O43316 350 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 SCG2P13521 617 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 HOXC8P31273 242 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 ICAM3P32942 547 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 PREPP48147 710 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 RRP1P56182 461 aaKnown RBP7.12□□□□□ -1.27
PABPC1-220ENST00000522658 MRPS6P82932 125 aaKnown RBP7.12□□□□□ -1.27
PABPC1-220ENST00000522658 SP2Q02086 613 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 GHRHRQ02643 423 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 SIGLEC14Q08ET2 396 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 PCNX4Q63HM2 1172 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 ANKRD34AQ69YU3 496 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 NFXL1Q6ZNB6 911 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 RBM23Q86U06 439 aaKnown RBP7.12□□□□□ -1.27
PABPC1-220ENST00000522658 FBXL6Q8N531 539 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 EFHBQ8N7U6 833 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 POF1BQ8WVV4 589 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 DNAJB3Q8WWF6 145 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 SEPT1Q8WYJ6 367 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 ANKS1AQ92625 1134 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 GPRASP2Q96D09 838 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 RPGRIP1Q96KN7 1286 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 SNX27Q96L92 541 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 INPP4AQ96PE3 977 aaPredicted RBP7.12□□□□□ -1.27
PABPC1-220ENST00000522658 CDCA3Q99618 268 aaPredicted RBP7.12□□□□□ -1.27
PABPC1-220ENST00000522658 SENP7Q9BQF6 1050 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 SDF4Q9BRK5 362 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 PHF7Q9BWX1 381 aaPredicted RBP7.12□□□□□ -1.27
PABPC1-220ENST00000522658 CHRDQ9H2X0 955 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 MFSD1Q9H3U5 465 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 RWDD1Q9H446 243 aaPredicted RBP7.12□□□□□ -1.27
PABPC1-220ENST00000522658 TLE6Q9H808 572 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 ENTPD7Q9NQZ7 604 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 PUF60Q9UHX1 559 aaKnown RBP7.12□□□□□ -1.27
PABPC1-220ENST00000522658 MAD2L2Q9UI95 211 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 SOX13Q9UN79 622 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 GINS2Q9Y248 185 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 NR2E1Q9Y466 385 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 PCDHB7Q9Y5E2 793 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 TRPV2Q9Y5S1 764 aa7.12□□□□□ -1.27
PABPC1-220ENST00000522658 LINC01565O15544 149 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 DGKIO75912 1065 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 RPLP1P05386 114 aaKnown RBP7.11□□□□□ -1.27
PABPC1-220ENST00000522658 CD52P31358 61 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 GTF2F1P35269 517 aaKnown RBP eCLIP7.11□□□□□ -1.27
PABPC1-220ENST00000522658 GRIK1P39086 918 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 GNAQP50148 359 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 ZXDAP98168 799 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 UBE3AQ05086 875 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 DLX2Q07687 328 aaPredicted RBP7.11□□□□□ -1.27
PABPC1-220ENST00000522658 HDAC1Q13547 482 aaPredicted RBP7.11□□□□□ -1.27
PABPC1-220ENST00000522658 MTMR1Q13613 665 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 LPIN1Q14693 890 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 GRM4Q14833 912 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 COL19A1Q14993 1142 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 FBXO47Q5MNV8 452 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 RUFY4Q6ZNE9 571 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 BMP8AQ7Z5Y6 402 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 ABI1Q8IZP0 508 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 SMRP1Q8NCR6 262 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 NCOA7Q8NI08 942 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 HHIPQ96QV1 700 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 TLR9Q9NR96 1032 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 BARX2Q9UMQ3 279 aaPredicted RBP7.11□□□□□ -1.27
PABPC1-220ENST00000522658 PLAGL2Q9UPG8 496 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 HIF3AQ9Y2N7 669 aa7.11□□□□□ -1.27
PABPC1-220ENST00000522658 USP15Q9Y4E8 981 aaPredicted RBP7.11□□□□□ -1.27
PABPC1-220ENST00000522658 MRPL42Q9Y6G3 142 aaKnown RBP7.11□□□□□ -1.27
PABPC1-220ENST00000522658 FRMPD4Q14CM0 1322 aa7.1□□□□□ -1.27
PABPC1-220ENST00000522658 MEGF11A6BM72 1044 aa7.1□□□□□ -1.27
PABPC1-220ENST00000522658 CCDC69A6NI79 296 aa7.1□□□□□ -1.27
PABPC1-220ENST00000522658 TBKBP1A7MCY6 615 aa7.1□□□□□ -1.27
PABPC1-220ENST00000522658 PDE2AO00408 941 aaPredicted RBP7.1□□□□□ -1.27
PABPC1-220ENST00000522658 ENPP3O14638 875 aa7.1□□□□□ -1.27
PABPC1-220ENST00000522658 PPP1R11O60927 126 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms