RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 E5RI56 91 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 SLC16A3O15427 465 aaKnown RBP17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 TRIM68Q6AZZ1 485 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 CCDC124Q96CT7 223 aaKnown RBP17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 TRIM54Q9BYV2 358 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 EMC2Q15006 297 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 DCP1BQ8IZD4 617 aaKnown RBP17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 WDR35Q9P2L0 1181 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 UPP2O95045 317 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 MAP3K14Q99558 947 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 DRC3Q9H069 523 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 LRRC7Q96NW7 1537 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 HSPA4LO95757 839 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 NMT1P30419 496 aaKnown RBP17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 RNF217Q8TC41 542 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 SPDL1Q96EA4 605 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 TXLNGQ9NUQ3 528 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 KPNA7A9QM74 516 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 COPEO14579 308 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 PCSK1P29120 753 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 EXOSC10Q01780 885 aaKnown RBP17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 ART3Q13508 389 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 SNX19Q92543 992 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 MOV10L1Q9BXT6 1211 aaKnown RBP17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 NOVA2Q9UNW9 492 aaKnown RBP17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 PPP1R12AO14974 1030 aaPredicted RBP17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 STMN1P16949 149 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 SCP2P22307 547 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 GCLCP48506 637 aaPredicted RBP17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 ERO1BQ86YB8 467 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 ATG4CQ96DT6 458 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 DDX27Q96GQ7 796 aaKnown RBP17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 SETBP1Q9Y6X0 1596 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 ZC3H4Q9UPT8 1303 aaKnown RBP17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 ACSL3O95573 720 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 ESRRBO95718 433 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 PRKCEQ02156 737 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 KLHL38Q2WGJ6 581 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 DEFB132Q7Z7B7 95 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 RDM1Q8NG50 284 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 MXRA8Q9BRK3 442 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 HSPBP1Q9NZL4 362 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 PCDHB8Q9UN66 801 aa17.24■□□□□ 0.35
PCDHA3-201ENST00000522353 PRRG1O14668 218 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 IL18RAPO95256 599 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 NSUN2Q08J23 767 aaKnown RBP eCLIP17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 C9orf131Q5VYM1 1079 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 PDCD7Q8N8D1 485 aaKnown RBP17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 GIPC2Q8TF65 315 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 MAP2K2P36507 400 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 SGSM1Q2NKQ1 1148 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 CLEC10AQ8IUN9 316 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 KLHL29Q96CT2 875 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 HACD3Q9P035 362 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 LMTK2Q8IWU2 1503 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 NR1D1P20393 614 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 MX2P20592 715 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 PPP4CP60510 307 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 NR1H3Q13133 447 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 HSP90AA5PQ58FG0 334 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 WDR75Q8IWA0 830 aaKnown RBP17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 C18orf8Q96DM3 657 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 TRIM9Q9C026 710 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 WNT8AQ9H1J5 351 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 AAASQ9NRG9 546 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 CDH6P55285 790 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 AP1B1Q10567 949 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 DCAF4L1Q3SXM0 396 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 ZNF746Q6NUN9 644 aaPredicted RBP17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 MED15Q96RN5 788 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 PHF20Q9BVI0 1012 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 PLEKHA5Q9HAU0 1116 aa17.23■□□□□ 0.35
PCDHA3-201ENST00000522353 LCP1P13796 627 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 ROR1Q01973 937 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 STKLD1Q8NE28 680 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 FAM96AQ9H5X1 160 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 ABCA9Q8IUA7 1624 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 A0A1W2PQC6 194 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 CYP2C19P33261 490 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 RAB42Q8N4Z0 105 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 SH3KBP1Q96B97 665 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 RMDN1Q96DB5 314 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 TRPC7Q9HCX4 862 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 SNX24Q9Y343 169 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 DLC1Q96QB1 1528 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 SKIP12755 728 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 CASP8Q14790 479 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 CRLF3Q8IUI8 442 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 IGDCC4Q8TDY8 1250 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 SERPINI1Q99574 410 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 DNAJC17Q9NVM6 304 aaKnown RBP17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 PPP1R9AQ9ULJ8 1098 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 TFRCP02786 760 aaKnown RBP17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 CDR2Q01850 454 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 OR6P1Q8NGX9 317 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 ASAP3Q8TDY4 903 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 GPRASP2Q96D09 838 aa17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
PCDHA3-201ENST00000522353 GAS2O43903 313 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms