RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 DOCK6Q96HP0 2047 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 CYP3A7-CYP3A51PA0A087WV96 503 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 PROB1E7EW31 1015 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 CDC45O75419 566 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 EOMESO95936 686 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 MYBP10242 640 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 CYP3A7P24462 503 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 Q4G0T1 1027 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 EARS2Q5JPH6 523 aaKnown RBP12.44□□□□□ -0.42
CSMD1-210ENST00000521646 ODR4Q5SWX8 454 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 KIAA1841Q6NSI8 718 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 DDX53Q86TM3 631 aaKnown RBP12.44□□□□□ -0.42
CSMD1-210ENST00000521646 ABI1Q8IZP0 508 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 ST13P5Q8NFI4 369 aaPredicted RBP12.44□□□□□ -0.42
CSMD1-210ENST00000521646 ATOH1Q92858 354 aaPredicted RBP12.44□□□□□ -0.42
CSMD1-210ENST00000521646 CDK15Q96Q40 435 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 RNF26Q9BY78 433 aaPredicted RBP12.44□□□□□ -0.42
CSMD1-210ENST00000521646 FAM105AQ9NUU6 356 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 PUF60Q9UHX1 559 aaKnown RBP12.44□□□□□ -0.42
CSMD1-210ENST00000521646 PIN4Q9Y237 131 aaKnown RBP12.44□□□□□ -0.42
CSMD1-210ENST00000521646 IRAK3Q9Y616 596 aa12.44□□□□□ -0.42
CSMD1-210ENST00000521646 CACNA1AO00555 2505 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 NARSO43776 548 aaKnown RBP12.43□□□□□ -0.42
CSMD1-210ENST00000521646 MAFO75444 373 aaPredicted RBP12.43□□□□□ -0.42
CSMD1-210ENST00000521646 ADH1CP00326 375 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 SSBP05455 408 aaKnown RBP eCLIP12.43□□□□□ -0.42
CSMD1-210ENST00000521646 CNPP09543 421 aaKnown RBP12.43□□□□□ -0.42
CSMD1-210ENST00000521646 RFC5P40937 340 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 USP11P51784 963 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 CLCN4P51793 760 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 KRT17Q04695 432 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 ITIH3Q06033 890 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 MTMR3Q13615 1198 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 NOMO2Q5JPE7 1267 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 MIER3Q7Z3K6 550 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 ZBTB33Q86T24 672 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 RHPN2Q8IUC4 686 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 SMG8Q8ND04 991 aaKnown RBP12.43□□□□□ -0.42
CSMD1-210ENST00000521646 RSAD2Q8WXG1 361 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 NLRP4Q96MN2 994 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 SCLT1Q96NL6 688 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 TEKT3Q9BXF9 490 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 GBP3Q9H0R5 595 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 NRBP2Q9NSY0 501 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 MIOSQ9NXC5 875 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 SUCLA2Q9P2R7 463 aaPredicted RBP12.43□□□□□ -0.42
CSMD1-210ENST00000521646 KCNJ14Q9UNX9 436 aa12.43□□□□□ -0.42
CSMD1-210ENST00000521646 PRR23AA6NEV1 266 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 ZNF623O75123 536 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 TMOD1P28289 359 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 GNA11P29992 359 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 CA8P35219 290 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 ALDH7A1P49419 539 aaKnown RBP12.42□□□□□ -0.42
CSMD1-210ENST00000521646 JAK3P52333 1124 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 KRT32Q14532 448 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 INF2Q27J81 1249 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 XKR3Q5GH77 459 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 TWF2Q6IBS0 349 aaKnown RBP12.42□□□□□ -0.42
CSMD1-210ENST00000521646 BLOC1S2Q6QNY1 142 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 FAM43BQ6ZT52 329 aaPredicted RBP12.42□□□□□ -0.42
CSMD1-210ENST00000521646 FRMD5Q7Z6J6 570 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 RNF168Q8IYW5 571 aaPredicted RBP12.42□□□□□ -0.42
CSMD1-210ENST00000521646 ZDHHC14Q8IZN3 488 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 HAS1Q92839 578 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 TMEM143Q96AN5 459 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 TMEM169Q96HH4 297 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 B3GALT6Q96L58 329 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 KLHL5Q96PQ7 755 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 EIF2AQ9BY44 585 aaKnown RBP12.42□□□□□ -0.42
CSMD1-210ENST00000521646 GCOM2Q9BZD3 368 aaPredicted RBP12.42□□□□□ -0.42
CSMD1-210ENST00000521646 CXCL16Q9H2A7 254 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 AGPAT5Q9NUQ2 364 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 CACNG4Q9UBN1 327 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 FKBPLQ9UIM3 349 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 PCDHA4Q9UN74 947 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 PCDHB2Q9Y5E7 798 aa12.42□□□□□ -0.42
CSMD1-210ENST00000521646 EP300Q09472 2414 aaPredicted RBP12.42□□□□□ -0.42
CSMD1-210ENST00000521646 FSD2A1L4K1 749 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 SFNP31947 248 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 NBL1P41271 181 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 WDR4P57081 412 aaKnown RBP12.41□□□□□ -0.42
CSMD1-210ENST00000521646 SPIRE1Q08AE8 756 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 MRPL10Q7Z7H8 261 aaKnown RBP12.41□□□□□ -0.42
CSMD1-210ENST00000521646 GPR149Q86SP6 731 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 NECTIN4Q96NY8 510 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 MRPL9Q9BYD2 267 aaKnown RBP12.41□□□□□ -0.42
CSMD1-210ENST00000521646 KCNMB3Q9NPA1 279 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 XPNPEP1Q9NQW7 623 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 CHST12Q9NRB3 414 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 DACT1Q9NYF0 836 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 NR2E1Q9Y466 385 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 HES2Q9Y543 173 aa12.41□□□□□ -0.42
CSMD1-210ENST00000521646 CCDC196A0A1B0GTZ2 297 aa12.4□□□□□ -0.42
CSMD1-210ENST00000521646 KRBA1A5PL33 1030 aa12.4□□□□□ -0.42
CSMD1-210ENST00000521646 NRP1O14786 923 aa12.4□□□□□ -0.42
CSMD1-210ENST00000521646 POMCP01189 267 aa12.4□□□□□ -0.42
CSMD1-210ENST00000521646 HMGB1P09429 215 aaKnown RBP12.4□□□□□ -0.42
CSMD1-210ENST00000521646 SRGAP2BP0DMP2 458 aa12.4□□□□□ -0.42
CSMD1-210ENST00000521646 SNRPBP14678 240 aaKnown RBP12.4□□□□□ -0.42
CSMD1-210ENST00000521646 IGFBP6P24592 240 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms