RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 CLDN3O15551 220 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 NR1I2O75469 434 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 KIF20AO95235 890 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 RPN1P04843 607 aaKnown RBP13.69□□□□□ -0.22
HDAC2-211ENST00000521233 FGFR1P11362 822 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 PROZP22891 400 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 CASP1P29466 404 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 PBX2P40425 430 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 DPYDQ12882 1025 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 ZC2HC1CQ53FD0 456 aaPredicted RBP13.69□□□□□ -0.22
HDAC2-211ENST00000521233 EEF1DP3Q658K8 133 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 SLFN12LQ6IEE8 588 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 CDR2LQ86X02 465 aaPredicted RBP13.69□□□□□ -0.22
HDAC2-211ENST00000521233 SMG8Q8ND04 991 aaKnown RBP13.69□□□□□ -0.22
HDAC2-211ENST00000521233 CCDC94Q9BW85 323 aaPredicted RBP13.69□□□□□ -0.22
HDAC2-211ENST00000521233 STRA6Q9BX79 667 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 CDT1Q9H211 546 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 PTPRHQ9HD43 1115 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 TOPORSQ9NS56 1045 aaPredicted RBP13.69□□□□□ -0.22
HDAC2-211ENST00000521233 GIT1Q9Y2X7 761 aa13.69□□□□□ -0.22
HDAC2-211ENST00000521233 LINC01553A4QN01 128 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 INPPL1O15357 1258 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 KLRC4O43908 158 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 RHOBTB3O94955 611 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 PRR29P0C7W0 189 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 MYBP10242 640 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 GRM5P41594 1212 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 MATR3P43243 847 aaKnown RBP eCLIP13.68□□□□□ -0.22
HDAC2-211ENST00000521233 FXR1P51114 621 aaKnown RBP eCLIP13.68□□□□□ -0.22
HDAC2-211ENST00000521233 YARSP54577 528 aaKnown RBP13.68□□□□□ -0.22
HDAC2-211ENST00000521233 MCL1Q07820 350 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 HSP90AA2PQ14568 343 aaPredicted RBP13.68□□□□□ -0.22
HDAC2-211ENST00000521233 KCNB1Q14721 858 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 KMT5BQ4FZB7 885 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 NOMO2Q5JPE7 1267 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 CLLU1OSQ5K130 101 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 SYCP3Q8IZU3 236 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 HELQQ8TDG4 1101 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 LRCH3Q96II8 777 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 TGS1Q96RS0 853 aaKnown RBP13.68□□□□□ -0.22
HDAC2-211ENST00000521233 RPS6KC1Q96S38 1066 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 RNF19AQ9NV58 838 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 KANSL3Q9P2N6 904 aa13.68□□□□□ -0.22
HDAC2-211ENST00000521233 RALGAPA2Q2PPJ7 1873 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 LAMA3Q16787 3333 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 LCHNA4D1U4 455 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 RBAK-RBAKDNI3L0D1 243 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 ABLIM1O14639 778 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 MYOGP15173 224 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 LAG3P18627 525 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 CASP5P51878 434 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 TAP1Q03518 808 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 BMT2Q1RMZ1 405 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 PAN2Q504Q3 1202 aaKnown RBP13.67□□□□□ -0.22
HDAC2-211ENST00000521233 AGMOQ6ZNB7 445 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 EPM2AIP1Q7L775 607 aaPredicted RBP13.67□□□□□ -0.22
HDAC2-211ENST00000521233 ZBTB33Q86T24 672 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 CLP1Q92989 425 aaKnown RBP13.67□□□□□ -0.22
HDAC2-211ENST00000521233 LPPQ93052 612 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 SMARCE1Q969G3 411 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 CASD1Q96PB1 797 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 GSDMAQ96QA5 445 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 APOL6Q9BWW8 343 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 ZNF576Q9H609 170 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 AAASQ9NRG9 546 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 INPP5FQ9Y2H2 1132 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 USP20Q9Y2K6 914 aa13.67□□□□□ -0.22
HDAC2-211ENST00000521233 FNDC1Q4ZHG4 1894 aaPredicted RBP13.67□□□□□ -0.22
HDAC2-211ENST00000521233 A0A0B4J269 797 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 KIAA0391O15091 583 aaKnown RBP13.66□□□□□ -0.22
HDAC2-211ENST00000521233 OGTO15294 1046 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 RECQL4O94761 1208 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 HARSP12081 509 aaKnown RBP13.66□□□□□ -0.22
HDAC2-211ENST00000521233 PPM1AP35813 382 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 MLH1P40692 756 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 GATMP50440 423 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 ERVK-21P61565 698 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 SNRPFP62306 86 aaKnown RBP13.66□□□□□ -0.22
HDAC2-211ENST00000521233 RNASELQ05823 741 aaKnown RBP13.66□□□□□ -0.22
HDAC2-211ENST00000521233 PNOCQ13519 176 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 GOLGA5Q8TBA6 731 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 ZNF507Q8TCN5 953 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 HPS3Q969F9 1004 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 MSTO1Q9BUK6 570 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 PLVAPQ9BX97 442 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 FGFBP2Q9BYJ0 223 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 GBP3Q9H0R5 595 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 SLC39A2Q9NP94 309 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 CGNQ9P2M7 1197 aaKnown RBP13.66□□□□□ -0.22
HDAC2-211ENST00000521233 HES2Q9Y543 173 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.66□□□□□ -0.22
HDAC2-211ENST00000521233 MRPL42Q9Y6G3 142 aaKnown RBP13.66□□□□□ -0.22
HDAC2-211ENST00000521233 STYXL1Q9Y6J8 313 aa13.66□□□□□ -0.22
HDAC2-211ENST00000521233 ARL5CA6NH57 179 aa13.65□□□□□ -0.22
HDAC2-211ENST00000521233 OFD1O75665 1012 aa13.65□□□□□ -0.22
HDAC2-211ENST00000521233 PRPF6O94906 941 aaKnown RBP13.65□□□□□ -0.22
HDAC2-211ENST00000521233 MBD3O95983 291 aa13.65□□□□□ -0.22
HDAC2-211ENST00000521233 CLTAP09496 248 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms