RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 MINDY3Q9H8M7 445 aa12.8□□□□□ -0.36
MRPS28-206ENST00000520946 ADAM28Q9UKQ2 775 aa12.8□□□□□ -0.36
MRPS28-206ENST00000520946 GIT1Q9Y2X7 761 aa12.8□□□□□ -0.36
MRPS28-206ENST00000520946 HES2Q9Y543 173 aa12.8□□□□□ -0.36
MRPS28-206ENST00000520946 SNX14Q9Y5W7 946 aa12.8□□□□□ -0.36
MRPS28-206ENST00000520946 NUMBLQ9Y6R0 609 aa12.8□□□□□ -0.36
MRPS28-206ENST00000520946 SPTBN4Q9H254 2564 aa12.8□□□□□ -0.36
MRPS28-206ENST00000520946 EDIL3O43854 480 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 XYLBO75191 536 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 C1RP00736 705 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 GCFC2P16383 781 aaKnown RBP12.79□□□□□ -0.36
MRPS28-206ENST00000520946 STK3Q13188 491 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 UBXN2BQ14CS0 331 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 EPHA7Q15375 998 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 MTSS1LQ765P7 747 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 NEK8Q86SG6 692 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 C4orf19Q8IY42 314 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 ZNF579Q8NAF0 562 aaKnown RBP12.79□□□□□ -0.36
MRPS28-206ENST00000520946 FOXQ1Q9C009 403 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 FNIP2Q9P278 1114 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 NID2Q14112 1375 aa12.79□□□□□ -0.36
MRPS28-206ENST00000520946 DENND4AQ7Z401 1863 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 C2orf16Q68DN1 1984 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 NCAM2O15394 837 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 SLC37A4O43826 429 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 TSPAN1O60635 241 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 ZMYND10O75800 440 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 REC8O95072 547 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 RPL17P18621 184 aaKnown RBP12.78□□□□□ -0.36
MRPS28-206ENST00000520946 SDHBP21912 280 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 AKAP5P24588 427 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 HSPA4P34932 840 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 PTENP60484 403 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 GPC5P78333 572 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 PFKPQ01813 784 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 CYP4A11Q02928 519 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 DSC1Q08554 894 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 SNW1Q13573 536 aaKnown RBP12.78□□□□□ -0.36
MRPS28-206ENST00000520946 HTR4Q13639 388 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 CTTNQ14247 550 aaKnown RBP12.78□□□□□ -0.36
MRPS28-206ENST00000520946 B3GNT9Q6UX72 402 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 GRASPQ7Z6J2 395 aaPredicted RBP12.78□□□□□ -0.36
MRPS28-206ENST00000520946 SLFN12Q8IYM2 578 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 FAM177A1Q8N128 213 aaPredicted RBP12.78□□□□□ -0.36
MRPS28-206ENST00000520946 FBXL16Q8N461 479 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 DAGLBQ8NCG7 672 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 PJA1Q8NG27 643 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 ZNF707Q96C28 371 aaPredicted RBP12.78□□□□□ -0.36
MRPS28-206ENST00000520946 BORCS6Q96GS4 357 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 DYDC2Q96IM9 177 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 GPR62Q9BZJ7 368 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 SLC2A4RGQ9NR83 387 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 CHST7Q9NS84 486 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 RGL1Q9NZL6 768 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 KLK14Q9P0G3 267 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 CDH7Q9ULB5 785 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 CYP46A1Q9Y6A2 500 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 CFAP54Q96N23 3096 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 SF3B1O75533 1304 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■■■■ 129.3
MRPS28-206ENST00000520946 USP34Q70CQ2 3546 aa12.78□□□□□ -0.36
MRPS28-206ENST00000520946 KANSL1LA0AUZ9 987 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 MED19A0JLT2 244 aaPredicted RBP12.77□□□□□ -0.37
MRPS28-206ENST00000520946 ANHXE9PGG2 379 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 CDKL5O76039 1030 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 NPTXRO95502 500 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 HNRNPA1P09651 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
MRPS28-206ENST00000520946 CSTF1Q05048 431 aaKnown RBP12.77□□□□□ -0.37
MRPS28-206ENST00000520946 GRIK3Q13003 919 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 HSP90AA2PQ14568 343 aaPredicted RBP12.77□□□□□ -0.37
MRPS28-206ENST00000520946 PDXDC1Q6P996 788 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 SLC27A1Q6PCB7 646 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 PIK3AP1Q6ZUJ8 805 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 GPR65Q8IYL9 337 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 DCLK2Q8N568 766 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 GPR161Q8N6U8 529 aaKnown RBP12.77□□□□□ -0.37
MRPS28-206ENST00000520946 RABGGTAQ92696 567 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 MBOAT7Q96N66 472 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 TTPALQ9BTX7 342 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 NXF3Q9H4D5 531 aaKnown RBP12.77□□□□□ -0.37
MRPS28-206ENST00000520946 MIOSQ9NXC5 875 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 KCNJ14Q9UNX9 436 aa12.77□□□□□ -0.37
MRPS28-206ENST00000520946 FAM170BA6NMN3 283 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 F8W810 466 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 TBX3O15119 743 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 CCL16O15467 120 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 DGAT1O75907 488 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 C8AP07357 584 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 STARD6P59095 220 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 PRKCQQ04759 706 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 ELAVL2Q12926 359 aaKnown RBP12.76□□□□□ -0.37
MRPS28-206ENST00000520946 MLF2Q15773 248 aaPredicted RBP12.76□□□□□ -0.37
MRPS28-206ENST00000520946 RSPO4Q2I0M5 234 aaPredicted RBP12.76□□□□□ -0.37
MRPS28-206ENST00000520946 SLC44A4Q53GD3 710 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
MRPS28-206ENST00000520946 FAM171A1Q5VUB5 890 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 PRSS55Q6UWB4 352 aaPredicted RBP12.76□□□□□ -0.37
MRPS28-206ENST00000520946 PARM1Q6UWI2 310 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 RUFY3Q7L099 469 aa12.76□□□□□ -0.37
MRPS28-206ENST00000520946 CENPQQ7L2Z9 268 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms