RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 ADCY1Q08828 1119 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 MCPH1Q8NEM0 835 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 SH3GL1Q99961 368 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 LRRC53A6NM62 1247 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 USP17L15C9J2P7 530 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 USP17L13C9JLJ4 530 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 USP17L11C9JVI0 530 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 USP17L18D6R9N7 530 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 USP17L22D6RA61 530 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 USP17L17D6RBQ6 530 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 USP17L19D6RCP7 530 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 USP17L20D6RJB6 530 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 EIF3HO15372 352 aaKnown RBP eCLIP12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 DDX5P17844 614 aaKnown RBP12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 PMLP29590 882 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 ROR2Q01974 943 aaKnown RBP12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 USP17L24Q0WX57 530 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 USP17L6PQ6QN14 398 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 SPATA21Q7Z572 469 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 ATP11CQ8NB49 1132 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 SLC10A4Q96EP9 437 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 RMDN3Q96TC7 470 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 MTRQ99707 1265 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 APOA1P02647 267 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 CASP1P29466 404 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 ARL13BQ3SXY8 428 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 TSGA10IPQ3SY00 556 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 TTC30AQ86WT1 665 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 SLC44A5Q8NCS7 719 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 ING2Q9H160 280 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 MRPL40Q9NQ50 206 aaKnown RBP12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 PPRC1Q5VV67 1664 aaKnown RBP12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 IPO5O00410 1097 aaKnown RBP12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 DCTN3O75935 186 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 HSPA1AP0DMV8 641 aaKnown RBP12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 HSPA1BP0DMV9 641 aaKnown RBP12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 TRPC1P48995 793 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 KRT76Q01546 638 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 CPVLQ9H3G5 476 aa12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 MMADHCQ9H3L0 296 aaPredicted RBP12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 CAB39Q9Y376 341 aaPredicted RBP12.83□□□□□ -0.36
ERGIC1-208ENST00000520399 EXOC1LA0A1B0GW35 172 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 KIF28PB7ZC32 967 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 TJP3O95049 919 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SFNP31947 248 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 CENPUQ71F23 418 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 BTN2A1Q7KYR7 527 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SLC26A7Q8TE54 656 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SRPK1Q96SB4 655 aaKnown RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 ADAMTS1Q9UHI8 967 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 FBXO2Q9UK22 296 aaPredicted RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 CCDC188H7C350 402 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SNAP23O00161 211 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 FGGP02679 453 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 MKRN3Q13064 507 aaKnown RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 ARID5BQ14865 1188 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 TLK2Q86UE8 772 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 TTC30BQ8N4P2 665 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 ZNF302Q9NR11 478 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 NEXMIFQ5QGS0 1516 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 TULP2O00295 520 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 MAPK13O15264 365 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SLC9A1P19634 815 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 HADHAP40939 763 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SLCO1A2P46721 670 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 ARPP19P56211 112 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 KNOP1Q1ED39 458 aaKnown RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 ZNF667Q5HYK9 610 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 TJAP1Q5JTD0 557 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 DSTYKQ6XUX3 929 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SGMS1Q86VZ5 419 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 GID8Q9NWU2 228 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SELENONQ9NZV5 590 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 NOVA2Q9UNW9 492 aaKnown RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SYNGAP1Q96PV0 1343 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SYNDIG1LA6NDD5 238 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 POTECB2RU33 542 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 NBNO60934 754 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 GPC3P51654 580 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SNRNP48Q6IEG0 339 aaKnown RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 ANKS3Q6ZW76 656 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 XXYLT1Q8NBI6 393 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 RFWD2Q8NHY2 731 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 TRIM63Q969Q1 353 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 OSBPL10Q9BXB5 764 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 AFF2P51816 1311 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 IQANK1A0A1B0GTG1 560 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 PODXLO00592 558 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SNX2O60749 519 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 ZBED1O96006 694 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 MRPS25P82663 173 aaKnown RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 GFPT1Q06210 699 aaPredicted RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 TBL3Q12788 808 aaKnown RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 NAA30Q147X3 362 aaPredicted RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 BZW1Q7L1Q6 419 aaKnown RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 SP8Q8IXZ3 490 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 ASPSCR1Q9BZE9 553 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms