RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 GIMAP8Q8ND71 665 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P41-201ENST00000520234 ZNF480Q8WV37 535 aa4.35□□□□□ -1.71
HMGB1P41-201ENST00000520234 RIN2Q8WYP3 895 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P41-201ENST00000520234 RPL10LQ96L21 214 aaKnown RBP4.35□□□□□ -1.71
HMGB1P41-201ENST00000520234 CDK5RAP1Q96SZ6 601 aaKnown RBP4.35□□□□□ -1.71
HMGB1P41-201ENST00000520234 GPHA2Q96T91 129 aa4.35□□□□□ -1.71
HMGB1P41-201ENST00000520234 NUP88Q99567 741 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P41-201ENST00000520234 IL23AQ9NPF7 189 aa4.35□□□□□ -1.71
HMGB1P41-201ENST00000520234 ING3Q9NXR8 418 aa4.35□□□□□ -1.71
HMGB1P41-201ENST00000520234 RCAN3Q9UKA8 241 aa4.35□□□□□ -1.71
HMGB1P41-201ENST00000520234 GIT1Q9Y2X7 761 aa4.35□□□□□ -1.71
HMGB1P41-201ENST00000520234 A0A1W2PRX2 142 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 AKR1B10O60218 316 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 RAD17O75943 681 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 ENDOD1O94919 500 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 ABLIM3O94929 683 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 C5AR1P21730 350 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 ECHS1P30084 290 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 PPP3CAQ08209 521 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 ODF1Q14990 250 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 MST1LQ2TV78 715 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 PDZD4Q76G19 769 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 ADGRE4PQ86SQ3 457 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 CMTR2Q8IYT2 770 aaKnown RBP4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 GPR135Q8IZ08 494 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 MSL3Q8N5Y2 521 aaKnown RBP4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 PPM1NQ8N819 430 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 CYFIP2Q96F07 1278 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 SLC2A13Q96QE2 648 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 MPHOSPH9Q99550 1183 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 PTPN18Q99952 460 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 PLA2G12BQ9BX93 195 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 CSRNP2Q9H175 543 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 BCO1Q9HAY6 547 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 TLR9Q9NR96 1032 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 GPRC5DQ9NZD1 345 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 TCEAL9Q9UHQ7 104 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 TUBD1Q9UJT1 453 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 ANKRD6Q9Y2G4 727 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 THRAP3Q9Y2W1 955 aaKnown RBP4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 SLC30A1Q9Y6M5 507 aa4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 WDR33Q9C0J8 1336 aaKnown RBP4.34□□□□□ -1.71
HMGB1P41-201ENST00000520234 UBE2QL1A1L167 161 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 AKAP10O43572 662 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 AMHP03971 560 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 CT47B1P0C2W7 299 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 AKAP5P24588 427 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 RAB27AP51159 221 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 KRTAP10-9P60411 292 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 DUSP8Q13202 625 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 SAFB2Q14151 953 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 GRM7Q14831 915 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 NOMO1Q15155 1222 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 MFSD5Q6N075 450 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 TCTN3Q6NUS6 607 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 LIMS2Q7Z4I7 341 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 MIER2Q8N344 545 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 OR7D4Q8NG98 312 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 OR5M3Q8NGP4 307 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 JDP2Q8WYK2 163 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 HOXB13Q92826 284 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 HDAC10Q969S8 669 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 HSPBAP1Q96EW2 488 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 GNRHR2Q96P88 292 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 CDC5LQ99459 802 aaKnown RBP4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 TCF25Q9BQ70 676 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 SSBP3Q9BWW4 388 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 ENKD1Q9H0I2 346 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 CDH19Q9H159 772 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 AGO3Q9H9G7 860 aaKnown RBP4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 PLA2G3Q9NZ20 509 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 NCDNQ9UBB6 729 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 PNMA8BQ9ULN7 279 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 ZFR2Q9UPR6 939 aaKnown RBP4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 DNM3Q9UQ16 869 aa4.33□□□□□ -1.72
HMGB1P41-201ENST00000520234 PATE3B3GLJ2 98 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 GPR42O15529 346 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 ITGA10O75578 1167 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 RFPL1O75677 317 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 IL33O95760 270 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 RPLP2P05387 115 aaKnown RBP4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 U2AF1L5P0DN76 240 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 ZSCAN20P17040 1043 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 LMO1P25800 156 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 ADSLP30566 484 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 GZMKP49863 264 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 PER3P56645 1201 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 U2AF1Q01081 240 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 KIF23Q02241 960 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 HHEXQ03014 270 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 MRPL49Q13405 166 aaKnown RBP4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 FHL2Q14192 279 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 ACAP1Q15027 740 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 NFE2Q16621 373 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 HS1BP3Q53T59 392 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 FAM111BQ6SJ93 734 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 MIGA2Q7L4E1 593 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 POLNQ7Z5Q5 900 aa4.32□□□□□ -1.72
HMGB1P41-201ENST00000520234 DNERQ8NFT8 737 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms