RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 SPG11Q96JI7 2443 aa3.17□□□□□ -1.9
MCF2-208ENST00000519895 MCM3APO60318 1980 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 A0A0G2JK05 382 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 C17orf102A2RUQ5 167 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 C5orf67F2Z3F1 127 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 MAPK13O15264 365 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 ZNF623O75123 536 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 RB1P06400 928 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 OR52Z1P0C646 297 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 SLURP2P0DP57 97 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 SELPP16109 830 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 CNTN2Q02246 1040 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 UBE3AQ05086 875 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 RESTQ13127 1097 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 ITGA7Q13683 1181 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 MXD4Q14582 209 aaPredicted RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 PLS1Q14651 629 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 PPP2R5AQ15172 486 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 ZYXQ15942 572 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 CCDC6Q16204 474 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 KCNA10Q16322 511 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 CCL14Q16627 93 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 NSMFQ6X4W1 530 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 HEATR3Q7Z4Q2 680 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 MRPL10Q7Z7H8 261 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 NT5DC4Q86YG4 428 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 HSCBQ8IWL3 235 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 SMRP1Q8NCR6 262 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 MCPH1Q8NEM0 835 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 HDAC7Q8WUI4 952 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 TIGD1Q96MW7 591 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 NACC1Q96RE7 527 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 EPAS1Q99814 870 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 PLVAPQ9BX97 442 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 DHX33Q9H6R0 707 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 ZSWIM4Q9H7M6 989 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 PRDM16Q9HAZ2 1276 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 TMEM51Q9NW97 253 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 LZTS1Q9Y250 596 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 RBM19Q9Y4C8 960 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 MRVI1Q9Y6F6 885 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 MICAL3Q7RTP6 2002 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 FRMD3A2A2Y4 597 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 IPO5O00410 1097 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 MSH4O15457 936 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 DGAT1O75907 488 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 ZNF131P52739 623 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 CRYBB1P53674 252 aaPredicted RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 ACTR2P61160 394 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 HTRA4P83105 476 aaPredicted RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 DSC3Q14574 896 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 ZDHHC14Q8IZN3 488 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 CPXCR1Q8N123 301 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 TBCKQ8TEA7 893 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 KIFAP3Q92845 792 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 LOXL4Q96JB6 756 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 CEP295NLQ96MC4 621 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 PCYT2Q99447 389 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 AZI2Q9H6S1 392 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 STARD7Q9NQZ5 370 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 DDX25Q9UHL0 483 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 RCOR1Q9UKL0 485 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 CFAP45Q9UL16 551 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 RAB23Q9ULC3 237 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 SCAF8Q9UPN6 1271 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 SMC3Q9UQE7 1217 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 SRPRBQ9Y5M8 271 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 TRPV2Q9Y5S1 764 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 CHD9Q3L8U1 2897 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 WDR87Q6ZQQ6 2873 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 SMCHD1A6NHR9 2005 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 PDCD11Q14690 1871 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 SPEGQ15772 3267 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 SPTAN1Q13813 2472 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 CUTAO60888 179 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 GGPS1O95749 300 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 EOMESO95936 686 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 CFBP00751 764 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 ASGR1P07306 291 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 GOLGA8HP0CJ92 632 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 GAP43P17677 238 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 QARSP47897 775 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 EFNA5P52803 228 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 FOSBP53539 338 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 RABGGTBP53611 331 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 MARSP56192 900 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 SLC39A14Q15043 492 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 PLCB4Q15147 1175 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 PLEKHG4Q58EX7 1191 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 TTC38Q5R3I4 469 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 CD302Q8IX05 232 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 C12orf56Q8IXR9 622 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 DIS3L2Q8IYB7 885 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 CMTR2Q8IYT2 770 aaKnown RBP3.16□□□□□ -1.9
MCF2-208ENST00000519895 FAM184AQ8NB25 1140 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 KREMEN2Q8NCW0 462 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 HAS1Q92839 578 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 SPATA33Q96N06 139 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 ZNF577Q9BSK1 485 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms