RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 ZBTB45Q96K62 511 aaPredicted RBP13.46□□□□□ -0.26
SPIDR-209ENST00000519141 MFSD14AQ96MC6 490 aa13.46□□□□□ -0.26
SPIDR-209ENST00000519141 ACO2Q99798 780 aaKnown RBP13.46□□□□□ -0.26
SPIDR-209ENST00000519141 FDXACB1Q9BRP7 624 aaPredicted RBP13.46□□□□□ -0.26
SPIDR-209ENST00000519141 MTG1Q9BT17 334 aaPredicted RBP13.46□□□□□ -0.26
SPIDR-209ENST00000519141 NUCKS1Q9H1E3 243 aaKnown RBP13.46□□□□□ -0.26
SPIDR-209ENST00000519141 GANQ9H2C0 597 aa13.46□□□□□ -0.26
SPIDR-209ENST00000519141 FZD8Q9H461 694 aa13.46□□□□□ -0.26
SPIDR-209ENST00000519141 IFT122Q9HBG6 1241 aa13.46□□□□□ -0.26
SPIDR-209ENST00000519141 SCN10AQ9Y5Y9 1956 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 PGK1P00558 417 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 CYP2C9P11712 490 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 HARSP12081 509 aaKnown RBP13.45□□□□□ -0.26
SPIDR-209ENST00000519141 CCND3P30281 292 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-209ENST00000519141 MXI1P50539 228 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 GPC3P51654 580 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 MCCD1P59942 119 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-209ENST00000519141 MEA1Q16626 185 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 FAM187BQ17R55 369 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 E4F1Q66K89 784 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-209ENST00000519141 PDXDC1Q6P996 788 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 RRAGAQ7L523 313 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 ZNF410Q86VK4 478 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 CCAR2Q8N163 923 aaKnown RBP13.45□□□□□ -0.26
SPIDR-209ENST00000519141 C7orf31Q8N865 590 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 PLEKHO2Q8TD55 490 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 PARD3BQ8TEW8 1205 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 PPP1R16BQ96T49 567 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 TCHPQ9BT92 498 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 FAM49AQ9H0Q0 323 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-209ENST00000519141 NLRC4Q9NPP4 1024 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 XPNPEP3Q9NQH7 507 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 KCND1Q9NSA2 647 aa13.45□□□□□ -0.26
SPIDR-209ENST00000519141 TRIP12Q14669 1992 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-209ENST00000519141 SMIM35A0A1B0GVV1 85 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 C17orf102A2RUQ5 167 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 LRRC53A6NM62 1247 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 TTLL13PA6NNM8 815 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 LRRIQ3A6PVS8 624 aaPredicted RBP13.44□□□□□ -0.26
SPIDR-209ENST00000519141 TULP1O00294 542 aaPredicted RBP13.44□□□□□ -0.26
SPIDR-209ENST00000519141 GNAT1P11488 350 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 ACTN1P12814 892 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 HNRNPH3P31942 346 aaKnown RBP13.44□□□□□ -0.26
SPIDR-209ENST00000519141 GCLMP48507 274 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 ACOT2P49753 483 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 NLRP11P59045 1033 aaKnown RBP13.44□□□□□ -0.26
SPIDR-209ENST00000519141 NKX3-2P78367 333 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 CDC42EP1Q00587 391 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 APBA1Q02410 837 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 PPP3CAQ08209 521 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 C1orf220Q5T0J3 134 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 ATF7IP2Q5U623 682 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 KLHDC7AQ5VTJ3 777 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 TRIM65Q6PJ69 517 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 MPZL3Q6UWV2 235 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 TSHZ1Q6ZSZ6 1077 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 PXYLP1Q8TE99 480 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 PPP1R13LQ8WUF5 828 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 PRIMPOLQ96LW4 560 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 HAPLN2Q9GZV7 340 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 INTS2Q9H0H0 1204 aaKnown RBP13.44□□□□□ -0.26
SPIDR-209ENST00000519141 MINDY3Q9H8M7 445 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 SIX2Q9NPC8 291 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 FBXL5Q9UKA1 691 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 PLAGL2Q9UPG8 496 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 CNTNAP2Q9UHC6 1331 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 USP27XA6NNY8 438 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 PMM2O15305 246 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 ZSCAN12O43309 604 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 ADAMTS4O75173 837 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 UCHL3P15374 230 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 GTF2H1P32780 548 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 PRMT2P55345 433 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 ADAM17P78536 824 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 CDK17Q00537 523 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 MCL1Q07820 350 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 MTF1Q14872 753 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 PSMD6Q15008 389 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 ZNF568Q3ZCX4 644 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 SLC9C1Q4G0N8 1177 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 MAP3K21Q5TCX8 1036 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 WDR59Q6PJI9 974 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 RAD9BQ6WBX8 426 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 TOGARAM2Q6ZUX3 1019 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 SRGAP1Q7Z6B7 1085 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 ZBTB33Q86T24 672 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 ZNF333Q96JL9 665 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 FNBP1Q96RU3 617 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 TMEM117Q9H0C3 514 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 TMEM8AQ9HCN3 771 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 TRMT1Q9NXH9 659 aaKnown RBP13.44□□□□□ -0.26
SPIDR-209ENST00000519141 RBAKQ9NYW8 714 aaPredicted RBP13.44□□□□□ -0.26
SPIDR-209ENST00000519141 HDAC6Q9UBN7 1215 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 TNFSF13BQ9Y275 285 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 DAAM1Q9Y4D1 1078 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 FHOD1Q9Y613 1164 aa13.44□□□□□ -0.26
SPIDR-209ENST00000519141 OGTO15294 1046 aa13.43□□□□□ -0.26
SPIDR-209ENST00000519141 B4GALT5O43286 388 aa13.43□□□□□ -0.26
SPIDR-209ENST00000519141 CCDC175P0C221 793 aa13.43□□□□□ -0.26
SPIDR-209ENST00000519141 DLATP10515 647 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms