RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FBXL7Q9UJT9 491 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 TAF6LQ9Y6J9 622 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 COL15A1P39059 1388 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 COL4A5P29400 1685 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 CDH23Q9H251 3354 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 FASNP49327 2511 aaKnown RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 TRANK1O15050 2925 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 ASGR2P07307 311 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 FPR2P25090 351 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 HOXC9P31274 260 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SLC16A1P53985 500 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 HERVK_113P62684 666 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 MRPS9P82933 396 aaKnown RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SP3Q02447 781 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SLC14A2Q15849 920 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 STEAP3Q658P3 488 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SLCO6A1Q86UG4 719 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 FAM43AQ8N2R8 423 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 NETO2Q8NC67 525 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 TMEM52Q8NDY8 209 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SHKBP1Q8TBC3 707 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 PLEKHO2Q8TD55 490 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SEC14L1Q92503 715 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 CDCA5Q96FF9 252 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 TEKT5Q96M29 485 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 FAM193BQ96PV7 902 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 ASB2Q96Q27 587 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 EPHX3Q9H6B9 360 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 ZMAT4Q9H898 229 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 ATP13A1Q9HD20 1204 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 PDLIM7Q9NR12 457 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 BSDC1Q9NW68 430 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SAP30BPQ9UHR5 308 aaKnown RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 MSRAQ9UJ68 235 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 NUDT5Q9UKK9 219 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 ZBTB21Q9ULJ3 1066 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 PLAGL2Q9UPG8 496 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 GPR45Q9Y5Y3 372 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 NPC1L1Q9UHC9 1359 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 PTPRZ1P23471 2315 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 MYO9BQ13459 2157 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 ST20-MTHFSA0A0A6YYL1 179 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 UBE2Q2LH0YL09 131 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 NKRFO15226 690 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 PPIP5K2O43314 1243 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 CTNND1O60716 968 aaKnown RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 COL6A2P12110 1019 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 FOSL1P15407 271 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 NPR1P16066 1061 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 HTR3AP46098 478 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 RTP1P59025 263 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 MRPS5P82675 430 aaKnown RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 TMEM132BQ14DG7 1078 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 UGT8Q16880 541 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 TBC1D10BQ4KMP7 808 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 C4orf46Q504U0 113 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 MOB2Q70IA6 237 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 OXR1Q8N573 874 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 USP38Q8NB14 1042 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 SLC35G2Q8TBE7 412 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 ATXN2LQ8WWM7 1075 aaKnown RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 LINC01599Q8WXQ3 324 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 RUNDC1Q96C34 613 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 SLC39A13Q96H72 371 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 C16orf92Q96LL3 132 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 MTA3Q9BTC8 594 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 THEGQ9P2T0 379 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 CNOT7Q9UIV1 285 aaKnown RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 ALPK3Q96L96 1907 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 CDHR2Q9BYE9 1310 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 KDM3BQ7LBC6 1761 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 TCRBV5S4A2TA0A5A2 114 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 DVL2O14641 736 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 FOXP2O15409 715 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PCDHGA12O60330 932 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 BUB1BO60566 1050 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 FURINP09958 794 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 H2AFB1P0C5Y9 115 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 H2AFB2P0C5Z0 115 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PTPN1P18031 435 aaKnown RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 AGXTP21549 392 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 GJA9P57773 515 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 FKBP1BP68106 108 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 ANO4Q32M45 955 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 COBLL1Q53SF7 1204 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 GJC2Q5T442 439 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 BTBD8Q5XKL5 378 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 TBC1D9BQ66K14 1250 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 INTS5Q6P9B9 1019 aaKnown RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 CHST15Q7LFX5 561 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PLD6Q8N2A8 252 aaKnown RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 FERMT2Q96AC1 680 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 IL17RAQ96F46 866 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 TNIP3Q96KP6 325 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 LRGUKQ96M69 825 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 MAP3K14Q99558 947 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 ELAC2Q9BQ52 826 aaKnown RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 UBA5Q9GZZ9 404 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 SEMA6BQ9H3T3 888 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms