RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 DUSP11O75319 330 aaKnown RBP7.36□□□□□ -1.23
CCDC6-203ENST00000518638 BMP7P18075 431 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 ADORA1P30542 326 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 CDK7P50613 346 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 NHLH1Q02575 133 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 DDX10Q13206 875 aaKnown RBP7.36□□□□□ -1.23
CCDC6-203ENST00000518638 PLS1Q14651 629 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 CLEC16AQ2KHT3 1053 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 ABCB5Q2M3G0 1257 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 ANKRD39Q53RE8 183 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 PRAMEF19Q5SWL8 479 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 GIMAP6Q6P9H5 292 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 TMED8Q6PL24 325 aaPredicted RBP7.36□□□□□ -1.23
CCDC6-203ENST00000518638 C16orf59Q7L2K0 433 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 MAPKAPK5Q8IW41 473 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 FAM126BQ8IXS8 530 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 KLHDC9Q8NEP7 349 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 MMP19Q99542 508 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 HIPK3Q9H422 1215 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 AATFQ9NY61 560 aaKnown RBP eCLIP7.36□□□□□ -1.23
CCDC6-203ENST00000518638 HMG20BQ9P0W2 317 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 PRKAG3Q9UGI9 489 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 DUSP13Q9UII6 198 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 YBX2Q9Y2T7 364 aaKnown RBP7.36□□□□□ -1.23
CCDC6-203ENST00000518638 MTCH2Q9Y6C9 303 aa7.36□□□□□ -1.23
CCDC6-203ENST00000518638 ZNFX1Q9P2E3 1918 aaKnown RBP7.36□□□□□ -1.23
CCDC6-203ENST00000518638 SMAD7O15105 426 aaKnown RBP7.35□□□□□ -1.23
CCDC6-203ENST00000518638 SHOXO15266 292 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 CABYRO75952 493 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 FLOT1O75955 427 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 ACTN1P12814 892 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 ATP2A2P16615 1042 aaKnown RBP7.35□□□□□ -1.23
CCDC6-203ENST00000518638 ETFBP38117 255 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 TIMM10P62072 90 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 AXDND1Q5T1B0 1012 aaPredicted RBP7.35□□□□□ -1.23
CCDC6-203ENST00000518638 DPH6Q7L8W6 267 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 CREG2Q8IUH2 290 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 DAGLBQ8NCG7 672 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 ALPK1Q96QP1 1244 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 UIMC1Q96RL1 719 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 PRRX2Q99811 253 aa7.35□□□□□ -1.23
CCDC6-203ENST00000518638 BDP1A6H8Y1 2624 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 KIF28PB7ZC32 967 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 PRAMEF1O95521 474 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 CD4P01730 458 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 ASGR1P07306 291 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 C6orf222P0C671 652 aaPredicted RBP7.34□□□□□ -1.23
CCDC6-203ENST00000518638 SLC7A5Q01650 507 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 GNPTABQ3T906 1256 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 CCSAPQ6IQ19 270 aaPredicted RBP7.34□□□□□ -1.23
CCDC6-203ENST00000518638 OTOP2Q7RTS6 562 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 ZNF655Q8N720 491 aaPredicted RBP7.34□□□□□ -1.23
CCDC6-203ENST00000518638 PHOSPHO2Q8TCD6 241 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 KLHL6Q8WZ60 621 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 NEUROD6Q96NK8 337 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 ACTR10Q9NZ32 417 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 FBXL21Q9UKT6 434 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 PCDHB10Q9UN67 800 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 FAM50BQ9Y247 325 aa7.34□□□□□ -1.23
CCDC6-203ENST00000518638 PARP14Q460N5 1801 aa7.34□□□□□ -1.24
CCDC6-203ENST00000518638 PRRC2BQ5JSZ5 2229 aaKnown RBP7.33□□□□□ -1.24
CCDC6-203ENST00000518638 WDR46O15213 610 aaKnown RBP7.33□□□□□ -1.24
CCDC6-203ENST00000518638 ZEB2O60315 1214 aa7.33□□□□□ -1.24
CCDC6-203ENST00000518638 TP53P04637 393 aaPredicted RBP7.33□□□□□ -1.24
CCDC6-203ENST00000518638 CYP2C18P33260 490 aa7.33□□□□□ -1.24
CCDC6-203ENST00000518638 GJA9P57773 515 aa7.33□□□□□ -1.24
CCDC6-203ENST00000518638 SHROOM1Q2M3G4 852 aaPredicted RBP7.33□□□□□ -1.24
CCDC6-203ENST00000518638 MAMDC4Q6UXC1 1216 aa7.33□□□□□ -1.24
CCDC6-203ENST00000518638 TMEM179Q6ZVK1 233 aa7.33□□□□□ -1.24
CCDC6-203ENST00000518638 RIOX2Q8IUF8 465 aa7.33□□□□□ -1.24
CCDC6-203ENST00000518638 MAGEB6Q8N7X4 407 aa7.33□□□□□ -1.24
CCDC6-203ENST00000518638 ACER1Q8TDN7 264 aa7.33□□□□□ -1.24
CCDC6-203ENST00000518638 UPF3AQ9H1J1 476 aaKnown RBP7.33□□□□□ -1.24
CCDC6-203ENST00000518638 ABHD16BQ9H3Z7 469 aa7.33□□□□□ -1.24
CCDC6-203ENST00000518638 FAM86C1Q9NVL1 165 aa7.33□□□□□ -1.24
CCDC6-203ENST00000518638 GFOD1Q9NXC2 390 aa7.33□□□□□ -1.24
CCDC6-203ENST00000518638 SAP30BPQ9UHR5 308 aaKnown RBP7.33□□□□□ -1.24
CCDC6-203ENST00000518638 ZHX1Q9UKY1 873 aaPredicted RBP7.33□□□□□ -1.24
CCDC6-203ENST00000518638 ZNF536O15090 1300 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 COL11A1P12107 1806 aaPredicted RBP7.32□□□□□ -1.24
CCDC6-203ENST00000518638 CBFA2T2O43439 604 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 DCXO43602 365 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 CA3P07451 260 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 SUPT20HL2P0C7V6 817 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 CD247P20963 164 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 RFC2P35250 354 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 MCAMP43121 646 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 RABGGTBP53611 331 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 NKX3-2P78367 333 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 EGR3Q06889 387 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 TFCP2Q12800 502 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 CCDC158Q5M9N0 1113 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 FAM178BQ8IXR5 827 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 DDX11Q96FC9 970 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 TCTN2Q96GX1 697 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 HAUS7Q99871 368 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 GP6Q9HCN6 339 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 CHST7Q9NS84 486 aa7.32□□□□□ -1.24
CCDC6-203ENST00000518638 PA2G4Q9UQ80 394 aaKnown RBP7.32□□□□□ -1.24
CCDC6-203ENST00000518638 MYH8P13535 1937 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms