RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ZIM2Q9NZV7 527 aa4.86□□□□□ -1.63
VPS13B-207ENST00000518569 KLHL42Q9P2K6 505 aa4.86□□□□□ -1.63
VPS13B-207ENST00000518569 G3BP2Q9UN86 482 aaKnown RBP4.86□□□□□ -1.63
VPS13B-207ENST00000518569 ZFR2Q9UPR6 939 aaKnown RBP4.86□□□□□ -1.63
VPS13B-207ENST00000518569 JAG2Q9Y219 1238 aa4.86□□□□□ -1.63
VPS13B-207ENST00000518569 IPPQ9Y573 584 aa4.86□□□□□ -1.63
VPS13B-207ENST00000518569 PATE3B3GLJ2 98 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 HTRA2O43464 458 aaPredicted RBP4.85□□□□□ -1.63
VPS13B-207ENST00000518569 SGTAO43765 313 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 ITGA10O75578 1167 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 IL33O95760 270 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 CT47B1P0C2W7 299 aaPredicted RBP4.85□□□□□ -1.63
VPS13B-207ENST00000518569 PF4V1P10720 104 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 CYP2C19P33261 490 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 SREBF1P36956 1147 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 CASRP41180 1078 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 MRPL49Q13405 166 aaKnown RBP4.85□□□□□ -1.63
VPS13B-207ENST00000518569 SEPT2Q15019 361 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 PPP2R5AQ15172 486 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 RRP12Q5JTH9 1297 aaKnown RBP4.85□□□□□ -1.63
VPS13B-207ENST00000518569 PPP4R3AQ6IN85 833 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 MFSD5Q6N075 450 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 FAM111BQ6SJ93 734 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 DBX2Q6ZNG2 339 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 LIMS2Q7Z4I7 341 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 POLNQ7Z5Q5 900 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 RAVER1Q8IY67 606 aaKnown RBP4.85□□□□□ -1.63
VPS13B-207ENST00000518569 TTC9BQ8N6N2 239 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 OR5M3Q8NGP4 307 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 IL17RAQ96F46 866 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 AIFM3Q96NN9 605 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 SAMD11Q96NU1 681 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 GNRHR2Q96P88 292 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 CDC5LQ99459 802 aaKnown RBP4.85□□□□□ -1.63
VPS13B-207ENST00000518569 C7orf25Q9BPX7 421 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 NCDNQ9UBB6 729 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 INTUQ9ULD6 942 aa4.85□□□□□ -1.63
VPS13B-207ENST00000518569 HOXA3O43365 443 aaPredicted RBP4.84□□□□□ -1.63
VPS13B-207ENST00000518569 FOXS1O43638 330 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 RPLP2P05387 115 aaKnown RBP4.84□□□□□ -1.63
VPS13B-207ENST00000518569 POU2F2P09086 479 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 EDNRBP24530 442 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 PER3P56645 1201 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 GTF2H3Q13889 308 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 NXNQ6DKJ4 435 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 CXorf57Q6NSI4 855 aaKnown RBP4.84□□□□□ -1.63
VPS13B-207ENST00000518569 MIGA2Q7L4E1 593 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 CHPFQ8IZ52 775 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 FUKQ8N0W3 1084 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 PRR18Q8N4B5 295 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 OR2I1PQ8NGU4 316 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 CASKIN2Q8WXE0 1202 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 ARL8AQ96BM9 186 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 OR14A2Q96R54 314 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 PDCD2LQ9BRP1 358 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 LANCL2Q9NS86 450 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 SERPINB13Q9UIV8 391 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 LIMCH1Q9UPQ0 1083 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 SIK3Q9Y2K2 1263 aa4.84□□□□□ -1.63
VPS13B-207ENST00000518569 CFAP20Q9Y6A4 193 aaKnown RBP4.84□□□□□ -1.63
VPS13B-207ENST00000518569 CCDC154A6NI56 674 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 TSPAN6O43657 245 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 DTNBO60941 627 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 IL2RBP14784 551 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 PDCP20941 246 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 GUCY1A2P33402 732 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 SLC6A9P48067 706 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 FLT3LGP49771 235 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 APBA1Q02410 837 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 FOXL1Q12952 345 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 SP140Q13342 867 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 UAP1L1Q3KQV9 507 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 FAM47AQ5JRC9 791 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 METTL24Q5JXM2 366 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 FKBP15Q5T1M5 1219 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 FAM102BQ5T8I3 360 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 DOK3Q7L591 496 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 ZNF572Q7Z3I7 529 aaPredicted RBP4.83□□□□□ -1.64
VPS13B-207ENST00000518569 APBB1IPQ7Z5R6 666 aaPredicted RBP4.83□□□□□ -1.64
VPS13B-207ENST00000518569 TCEAL8Q8IYN2 117 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 TRMT2AQ8IZ69 625 aaKnown RBP4.83□□□□□ -1.64
VPS13B-207ENST00000518569 PQLC1Q8N2U9 271 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 DPF2Q92785 391 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 ZNF512Q96ME7 567 aaPredicted RBP4.83□□□□□ -1.64
VPS13B-207ENST00000518569 UHRF1Q96T88 793 aaPredicted RBP4.83□□□□□ -1.64
VPS13B-207ENST00000518569 BDH2Q9BUT1 245 aa4.83□□□□□ -1.64
VPS13B-207ENST00000518569 HECAQ9UBI9 543 aaPredicted RBP4.83□□□□□ -1.64
VPS13B-207ENST00000518569 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.83□□□□□ -1.64
VPS13B-207ENST00000518569 TEX33O43247 280 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 ADCY6O43306 1168 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 ZNF623O75123 536 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 SCGB1D2O95969 90 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 COMTP21964 271 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 MSX2P35548 267 aaPredicted RBP4.82□□□□□ -1.64
VPS13B-207ENST00000518569 CDC42EP1Q00587 391 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 PLP2Q04941 152 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 HS1BP3Q53T59 392 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 ATAT1Q5SQI0 421 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 PRAMEF14Q5SWL7 426 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 USP45Q70EL2 814 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms