RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 SRGAP2CP0DJJ0 459 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 SFPQP23246 707 aaKnown RBP eCLIP10.76□□□□□ -0.69
TTC1-202ENST00000518560 FSHRP23945 695 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 YWHABP31946 246 aaKnown RBP10.76□□□□□ -0.69
TTC1-202ENST00000518560 TXKP42681 527 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 PHKA2P46019 1235 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 SMAD4Q13485 552 aaKnown RBP10.76□□□□□ -0.69
TTC1-202ENST00000518560 CALCRLQ16602 461 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 C8orf34Q49A92 452 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 C4orf48Q5BLP8 95 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 TWF2Q6IBS0 349 aaKnown RBP10.76□□□□□ -0.69
TTC1-202ENST00000518560 LLGL2Q6P1M3 1020 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 ZNF410Q86VK4 478 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 TPH2Q8IWU9 490 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 C4orf19Q8IY42 314 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 BCL7CQ8WUZ0 217 aaPredicted RBP10.76□□□□□ -0.69
TTC1-202ENST00000518560 PRPF31Q8WWY3 499 aaKnown RBP10.76□□□□□ -0.69
TTC1-202ENST00000518560 SLC7A3Q8WY07 619 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 SCARF2Q96GP6 870 aaPredicted RBP10.76□□□□□ -0.69
TTC1-202ENST00000518560 ZNF558Q96NG5 402 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 KIF2CQ99661 725 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 EIF2AK1Q9BQI3 630 aaKnown RBP10.76□□□□□ -0.69
TTC1-202ENST00000518560 APOL5Q9BWW9 433 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 GBP3Q9H0R5 595 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 DHX33Q9H6R0 707 aaKnown RBP10.76□□□□□ -0.69
TTC1-202ENST00000518560 TLE6Q9H808 572 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 TTC12Q9H892 705 aaPredicted RBP10.76□□□□□ -0.69
TTC1-202ENST00000518560 CDH22Q9UJ99 828 aa10.76□□□□□ -0.69
TTC1-202ENST00000518560 PLXNA3P51805 1871 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 NEMFO60524 1076 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 ZC3H11AO75152 810 aaKnown RBP eCLIP10.75□□□□□ -0.69
TTC1-202ENST00000518560 SLITRK3O94933 977 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 BAG4O95429 457 aaKnown RBP10.75□□□□□ -0.69
TTC1-202ENST00000518560 F12P00748 615 aaPredicted RBP10.75□□□□□ -0.69
TTC1-202ENST00000518560 MCM7P33993 719 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 AFF1P51825 1210 aaKnown RBP10.75□□□□□ -0.69
TTC1-202ENST00000518560 LAMTOR4Q0VGL1 99 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 TRIM29Q14134 588 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 SMAD2Q15796 467 aaKnown RBP10.75□□□□□ -0.69
TTC1-202ENST00000518560 VASH1Q7L8A9 365 aaPredicted RBP10.75□□□□□ -0.69
TTC1-202ENST00000518560 ADHFE1Q8IWW8 467 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 SLFN12Q8IYM2 578 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 SLC39A11Q8N1S5 342 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 RNF149Q8NC42 400 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 FEZF2Q8TBJ5 459 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 ASAP3Q8TDY4 903 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 PIGOQ8TEQ8 1089 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 PSPC1Q8WXF1 523 aaKnown RBP10.75□□□□□ -0.69
TTC1-202ENST00000518560 AUTS2Q8WXX7 1259 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 MRPS27Q92552 414 aaKnown RBP10.75□□□□□ -0.69
TTC1-202ENST00000518560 NAP1L4Q99733 375 aaKnown RBP10.75□□□□□ -0.69
TTC1-202ENST00000518560 TCF25Q9BQ70 676 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 C1QTNF1Q9BXJ1 281 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 ENTPD7Q9NQZ7 604 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 AGPAT5Q9NUQ2 364 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 FAM105AQ9NUU6 356 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 DACT1Q9NYF0 836 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 DNAJB4Q9UDY4 337 aa10.75□□□□□ -0.69
TTC1-202ENST00000518560 C2orf16Q68DN1 1984 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 PI4K2BG5E9Z4 385 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 NCK2O43639 380 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 USO1O60763 962 aaKnown RBP10.74□□□□□ -0.69
TTC1-202ENST00000518560 CA8P35219 290 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 RFC5P40937 340 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 BCAR1P56945 870 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 PLCB3Q01970 1234 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 UBE3AQ05086 875 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 DUSP6Q16828 381 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 TMEM31Q5JXX7 168 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 UBXN11Q5T124 520 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 AGMOQ6ZNB7 445 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 FERMT3Q86UX7 667 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 SMRP1Q8NCR6 262 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 ARMC2Q8NEN0 867 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 PPP2R3CQ969Q6 453 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 CPB2Q96IY4 423 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 MTMR9Q96QG7 549 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 EIF2AQ9BY44 585 aaKnown RBP10.74□□□□□ -0.69
TTC1-202ENST00000518560 ZSWIM4Q9H7M6 989 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 NRDE2Q9H7Z3 1164 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 TBC1D13Q9NVG8 400 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 SPG21Q9NZD8 308 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 PCDHA12Q9UN75 941 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 LIMCH1Q9UPQ0 1083 aa10.74□□□□□ -0.69
TTC1-202ENST00000518560 USP15Q9Y4E8 981 aaPredicted RBP10.74□□□□□ -0.69
TTC1-202ENST00000518560 DENND4AQ7Z401 1863 aa10.73□□□□□ -0.69
TTC1-202ENST00000518560 CFAP99D6REC4 459 aa10.73□□□□□ -0.69
TTC1-202ENST00000518560 B4GALT5O43286 388 aa10.73□□□□□ -0.69
TTC1-202ENST00000518560 DKC1O60832 514 aaKnown RBP eCLIP10.73□□□□□ -0.69
TTC1-202ENST00000518560 MED24O75448 989 aa10.73□□□□□ -0.69
TTC1-202ENST00000518560 OFD1O75665 1012 aa10.73□□□□□ -0.69
TTC1-202ENST00000518560 EOMESO95936 686 aa10.73□□□□□ -0.69
TTC1-202ENST00000518560 CENPBP07199 599 aaPredicted RBP10.73□□□□□ -0.69
TTC1-202ENST00000518560 SP100P23497 879 aaPredicted RBP10.73□□□□□ -0.69
TTC1-202ENST00000518560 HOXA11P31270 313 aaPredicted RBP10.73□□□□□ -0.69
TTC1-202ENST00000518560 SLC11A1P49279 550 aa10.73□□□□□ -0.69
TTC1-202ENST00000518560 CAPSQ13938 189 aa10.73□□□□□ -0.69
TTC1-202ENST00000518560 ZNF174Q15697 407 aa10.73□□□□□ -0.69
TTC1-202ENST00000518560 RNFT1Q5M7Z0 435 aa10.73□□□□□ -0.69
TTC1-202ENST00000518560 MAEAQ7L5Y9 396 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms