RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 ZBED8Q8IZ13 594 aa10.91□□□□□ -0.66
SMG7-215ENST00000515829 SLC17A8Q8NDX2 589 aa10.91□□□□□ -0.66
SMG7-215ENST00000515829 PYROXD1Q8WU10 500 aa10.91□□□□□ -0.66
SMG7-215ENST00000515829 PURBQ96QR8 312 aaKnown RBP10.91□□□□□ -0.66
SMG7-215ENST00000515829 RAVER2Q9HCJ3 691 aaKnown RBP10.91□□□□□ -0.66
SMG7-215ENST00000515829 DDX4Q9NQI0 724 aaKnown RBP10.91□□□□□ -0.66
SMG7-215ENST00000515829 NXF1Q9UBU9 619 aaKnown RBP10.91□□□□□ -0.66
SMG7-215ENST00000515829 SUFUQ9UMX1 484 aa10.91□□□□□ -0.66
SMG7-215ENST00000515829 FAM86B1E9PN63 330 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 IGF2BP3O00425 579 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMG7-215ENST00000515829 INHBAP08476 426 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 FAM86B2P0C5J1 330 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 HADHQ16836 314 aaKnown RBP10.9□□□□□ -0.66
SMG7-215ENST00000515829 ANKRD20A8PQ5CZ79 823 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 ZSWIM1Q9BR11 485 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 TMEM117Q9H0C3 514 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 MAD1L1Q9Y6D9 718 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 RASSF10A6NK89 507 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 H7C0C1 242 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 SHBGP04278 402 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 ATP5OP48047 213 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 ITGA8P53708 1063 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 LGSNQ5TDP6 509 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 ZNF341Q9BYN7 854 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 TAS2R14Q9NYV8 317 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 GOLGA8RI6L899 631 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 TLR3O15455 904 aaKnown RBP10.9□□□□□ -0.66
SMG7-215ENST00000515829 SMIM24O75264 130 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 TAF12Q16514 161 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 SLC13A5Q86YT5 568 aaPredicted RBP10.9□□□□□ -0.66
SMG7-215ENST00000515829 ARHGAP24Q8N264 748 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 PDCD7Q8N8D1 485 aaKnown RBP10.9□□□□□ -0.66
SMG7-215ENST00000515829 FBXL13Q8NEE6 735 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 KIFC3Q9BVG8 833 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 TRIM6Q9C030 488 aaPredicted RBP10.9□□□□□ -0.66
SMG7-215ENST00000515829 YIPF3Q9GZM5 350 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 ARL2BPQ9Y2Y0 163 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 CFAP73A6NFT4 308 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 MT-ND3P03897 115 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 SYCP2LQ5T4T6 812 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 ANKMY2Q8IV38 441 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 CCHCR1Q8TD31 782 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 TTC17Q96AE7 1141 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 SPDL1Q96EA4 605 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 SH3GL2Q99962 352 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 CBWD1Q9BRT8 395 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 FAM129AQ9BZQ8 928 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 GANQ9H2C0 597 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 NYAP2Q9P242 653 aa10.9□□□□□ -0.66
SMG7-215ENST00000515829 MYO3BQ8WXR4 1341 aa10.9□□□□□ -0.67
SMG7-215ENST00000515829 TRAPPC3O43617 180 aa10.9□□□□□ -0.67
SMG7-215ENST00000515829 NOL4O94818 638 aa10.9□□□□□ -0.67
SMG7-215ENST00000515829 MMP10P09238 476 aa10.9□□□□□ -0.67
SMG7-215ENST00000515829 ALCAMQ13740 583 aa10.9□□□□□ -0.67
SMG7-215ENST00000515829 CENPUQ71F23 418 aa10.9□□□□□ -0.67
SMG7-215ENST00000515829 LDHDQ86WU2 507 aa10.9□□□□□ -0.67
SMG7-215ENST00000515829 ATP6V0A1Q93050 837 aa10.9□□□□□ -0.67
SMG7-215ENST00000515829 CHD2O14647 1828 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 ECE2O60344 883 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 LUC7L3O95232 432 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 GGPS1O95749 300 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 NPR1P16066 1061 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 IRX4P78413 519 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 MRPS9P82933 396 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 TFAMQ00059 246 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 RFX8Q6ZV50 586 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 LRRC15Q8TF66 581 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 SCAF8Q9UPN6 1271 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 TMEM191BP0C7N4 346 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 ARL1P40616 181 aaPredicted RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 PTENP60484 403 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 PLA2G4FQ68DD2 849 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 CYFIP1Q7L576 1253 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 SUGP1Q8IWZ8 645 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 HACE1Q8IYU2 909 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 RBM15Q96T37 977 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMG7-215ENST00000515829 CPSF2Q9P2I0 782 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 TRAF3IP3Q9Y228 551 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 PDIA2Q13087 525 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 SNRNP35Q16560 246 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 P3H1Q32P28 736 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 CBWD6Q4V339 395 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 CBWD3Q5JTY5 395 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 CBWD5Q5RIA9 395 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 RC3H1Q5TC82 1133 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 SP8Q8IXZ3 490 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 CNPY4Q8N129 248 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 ATL2Q8NHH9 583 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 RMDN3Q96TC7 470 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 POP1Q99575 1024 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 MIS12Q9H081 205 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 ACP6Q9NPH0 428 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 GPRC5CQ9NQ84 441 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 TPX2Q9ULW0 747 aaKnown RBP10.89□□□□□ -0.67
SMG7-215ENST00000515829 EIF3DO15371 548 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMG7-215ENST00000515829 APBA3O96018 575 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 BAG6P46379 1132 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 SLC12A3P55017 1021 aa10.89□□□□□ -0.67
SMG7-215ENST00000515829 NPEPPSP55786 919 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms