RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TARS2Q9BW92 718 aaKnown RBP12.67□□□□□ -0.38
VCAN-212ENST00000515397 C2orf40Q9H1Z8 148 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 KMT5AQ9NQR1 393 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 BLOC1S4Q9NUP1 217 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 CLEC1BQ9P126 229 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 FAN1Q9Y2M0 1017 aa12.67□□□□□ -0.38
VCAN-212ENST00000515397 CNTNAP2Q9UHC6 1331 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 GRXCR2A6NFK2 248 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 TNFRSF10AO00220 468 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 C2CD2LO14523 706 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 HSP90AA1P07900 732 aaKnown RBP12.66□□□□□ -0.38
VCAN-212ENST00000515397 MYBP10242 640 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 HARSP12081 509 aaKnown RBP12.66□□□□□ -0.38
VCAN-212ENST00000515397 PPM1AP35813 382 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 LONP1P36776 959 aaKnown RBP12.66□□□□□ -0.38
VCAN-212ENST00000515397 OSTNP61366 133 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 PKP1Q13835 747 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 ATF7IP2Q5U623 682 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 KANK3Q6NY19 840 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 GPBP1Q86WP2 473 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 COLGALT2Q8IYK4 626 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 EFHBQ8N7U6 833 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 CEP120Q8N960 986 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 CNNM3Q8NE01 707 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 KHSRPQ92945 711 aaKnown RBP eCLIP12.66□□□□□ -0.38
VCAN-212ENST00000515397 PPP2R3CQ969Q6 453 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 CALML4Q96GE6 196 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 PAAF1Q9BRP4 392 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 NT5C3AQ9H0P0 336 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 UBN1Q9NPG3 1134 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
VCAN-212ENST00000515397 CDH22Q9UJ99 828 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 FBXO2Q9UK22 296 aaPredicted RBP12.66□□□□□ -0.38
VCAN-212ENST00000515397 LZTS1Q9Y250 596 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 GIT1Q9Y2X7 761 aa12.66□□□□□ -0.38
VCAN-212ENST00000515397 C2orf71A6NGG8 1288 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 N4BP3O15049 544 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 BMP15O95972 392 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 IGFBP6P24592 240 aaPredicted RBP12.65□□□□□ -0.38
VCAN-212ENST00000515397 GUCY2CP25092 1073 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 DMP1Q13316 513 aaPredicted RBP12.65□□□□□ -0.38
VCAN-212ENST00000515397 DUSP6Q16828 381 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 SEZ6Q53EL9 994 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 DDX53Q86TM3 631 aaKnown RBP12.65□□□□□ -0.38
VCAN-212ENST00000515397 MRPL43Q8N983 215 aaKnown RBP12.65□□□□□ -0.38
VCAN-212ENST00000515397 FEZF2Q8TBJ5 459 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 B3GALT6Q96L58 329 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 PRIMPOLQ96LW4 560 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 AK8Q96MA6 479 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 DRC1Q96MC2 740 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 ACO2Q99798 780 aaKnown RBP12.65□□□□□ -0.38
VCAN-212ENST00000515397 ZHX3Q9H4I2 956 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 NGRNQ9NPE2 291 aaKnown RBP12.65□□□□□ -0.38
VCAN-212ENST00000515397 KANSL3Q9P2N6 904 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 CD207Q9UJ71 328 aa12.65□□□□□ -0.38
VCAN-212ENST00000515397 SRPRBQ9Y5M8 271 aaKnown RBP12.65□□□□□ -0.38
VCAN-212ENST00000515397 MUC3AQ02505 3323 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.64□□□□□ -0.39
VCAN-212ENST00000515397 MBTPS2O43462 519 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 NCK2O43639 380 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 CLASP2O75122 1294 aaKnown RBP12.64□□□□□ -0.39
VCAN-212ENST00000515397 RECQL4O94761 1208 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 PLS3P13797 630 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 EFNA5P52803 228 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 SMC1AQ14683 1233 aaKnown RBP12.64□□□□□ -0.39
VCAN-212ENST00000515397 SLC39A14Q15043 492 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 GLRA4Q5JXX5 417 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 FAM178BQ8IXR5 827 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 C12orf76Q8N812 135 aaPredicted RBP12.64□□□□□ -0.39
VCAN-212ENST00000515397 HASPINQ8TF76 798 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 RAD54LQ92698 747 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 CHAMP1Q96JM3 812 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 MSLNLQ96KJ4 702 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 REEP2Q9BRK0 252 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 TCHPQ9BT92 498 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 ZBP1Q9H171 429 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 MARCH5Q9NX47 278 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 ARHGAP28Q9P2N2 729 aa12.64□□□□□ -0.39
VCAN-212ENST00000515397 CASTOR2A6NHX0 329 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 PTGESO14684 152 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 KRT18P05783 430 aaKnown RBP12.63□□□□□ -0.39
VCAN-212ENST00000515397 WEE2P0C1S8 567 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 SSTR3P32745 418 aaPredicted RBP12.63□□□□□ -0.39
VCAN-212ENST00000515397 DDIT3P35638 169 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 DSC1Q08554 894 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 GIT2Q14161 759 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 STK38Q15208 465 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 PDE12Q6L8Q7 609 aaKnown RBP12.63□□□□□ -0.39
VCAN-212ENST00000515397 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 HACE1Q8IYU2 909 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 TMEM130Q8N3G9 435 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 MYCT1Q8N699 235 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 TMEM87AQ8NBN3 555 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 TMEM161BQ8NDZ6 487 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 RPS6KC1Q96S38 1066 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 ADPGKQ9BRR6 497 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 TMEM175Q9BSA9 504 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 CDT1Q9H211 546 aa12.63□□□□□ -0.39
VCAN-212ENST00000515397 ZSCAN16Q9H4T2 348 aaPredicted RBP12.63□□□□□ -0.39
VCAN-212ENST00000515397 TMEM134Q9H6X4 195 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms