RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 ZNF280BQ86YH2 543 aa12.66□□□□□ -0.38
SUB1-213ENST00000515355 SPPL3Q8TCT6 385 aa12.66□□□□□ -0.38
SUB1-213ENST00000515355 DDX12PQ92771 950 aa12.66□□□□□ -0.38
SUB1-213ENST00000515355 RPS6KC1Q96S38 1066 aa12.66□□□□□ -0.38
SUB1-213ENST00000515355 TMEM134Q9H6X4 195 aa12.66□□□□□ -0.38
SUB1-213ENST00000515355 GDPD2Q9HCC8 539 aa12.66□□□□□ -0.38
SUB1-213ENST00000515355 SPG21Q9NZD8 308 aa12.66□□□□□ -0.38
SUB1-213ENST00000515355 ANKFY1Q9P2R3 1169 aa12.66□□□□□ -0.38
SUB1-213ENST00000515355 RCOR1Q9UKL0 485 aa12.66□□□□□ -0.38
SUB1-213ENST00000515355 ODF2LQ9ULJ1 636 aa12.66□□□□□ -0.38
SUB1-213ENST00000515355 PRUNE2Q8WUY3 3088 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 H0YCG3 227 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 NMT1P30419 496 aaKnown RBP12.65□□□□□ -0.38
SUB1-213ENST00000515355 ANP32AP39687 249 aaKnown RBP12.65□□□□□ -0.38
SUB1-213ENST00000515355 OR1G1P47890 313 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 NUCB2P80303 420 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 ZNF568Q3ZCX4 644 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 NAALADL2Q58DX5 795 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 TCEAL5Q5H9L2 206 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 AXDND1Q5T1B0 1012 aaPredicted RBP12.65□□□□□ -0.38
SUB1-213ENST00000515355 TAS1R3Q7RTX0 852 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 HAUS6Q7Z4H7 955 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 RBM23Q86U06 439 aaKnown RBP12.65□□□□□ -0.38
SUB1-213ENST00000515355 IQUBQ8NA54 791 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 TMEM161BQ8NDZ6 487 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 LEO1Q8WVC0 666 aaPredicted RBP12.65□□□□□ -0.38
SUB1-213ENST00000515355 SPIRE2Q8WWL2 714 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 P2RX5Q93086 422 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 ZBTB45Q96K62 511 aaPredicted RBP12.65□□□□□ -0.38
SUB1-213ENST00000515355 ACO2Q99798 780 aaKnown RBP12.65□□□□□ -0.38
SUB1-213ENST00000515355 NRDE2Q9H7Z3 1164 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 ENTPD7Q9NQZ7 604 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 MIOSQ9NXC5 875 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 LMCD1Q9NZU5 365 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 ARHGAP28Q9P2N2 729 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 KANSL3Q9P2N6 904 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 DNAJB4Q9UDY4 337 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
SUB1-213ENST00000515355 GIT1Q9Y2X7 761 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 PRG3Q9Y2Y8 225 aaPredicted RBP12.65□□□□□ -0.38
SUB1-213ENST00000515355 PCDHGC5Q9Y5F6 944 aa12.65□□□□□ -0.38
SUB1-213ENST00000515355 MORC2Q9Y6X9 1032 aaPredicted RBP12.65□□□□□ -0.38
SUB1-213ENST00000515355 RECQL4O94761 1208 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 DDHD2O94830 711 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 ALDH2P05091 517 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 MAPTP10636 758 aaKnown RBP12.64□□□□□ -0.39
SUB1-213ENST00000515355 DNAJB1P25685 340 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 IRS1P35568 1242 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 AFMP43652 599 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 LIG4P49917 911 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 DCAF4L1Q3SXM0 396 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 TIGD5Q53EQ6 642 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 HERC4Q5GLZ8 1057 aaPredicted RBP12.64□□□□□ -0.39
SUB1-213ENST00000515355 PLPP4Q5VZY2 271 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 TMC7Q7Z402 723 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 SFR1Q86XK3 245 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.64□□□□□ -0.39
SUB1-213ENST00000515355 TMEM87AQ8NBN3 555 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 RABGGTAQ92696 567 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 TMEM169Q96HH4 297 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 NTPCRQ9BSD7 190 aaKnown RBP12.64□□□□□ -0.39
SUB1-213ENST00000515355 NSUN3Q9H649 340 aaKnown RBP12.64□□□□□ -0.39
SUB1-213ENST00000515355 MRPL44Q9H9J2 332 aaKnown RBP12.64□□□□□ -0.39
SUB1-213ENST00000515355 TNFSF13BQ9Y275 285 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 FAN1Q9Y2M0 1017 aa12.64□□□□□ -0.39
SUB1-213ENST00000515355 A0A1B0GVL5 298 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 HNRNPDLO14979 420 aaKnown RBP12.63□□□□□ -0.39
SUB1-213ENST00000515355 NR1I2O75469 434 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 GALTP07902 379 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 POU3F3P20264 500 aaPredicted RBP12.63□□□□□ -0.39
SUB1-213ENST00000515355 PPM1AP35813 382 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 SLC11A1P49279 550 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 YARSP54577 528 aaKnown RBP12.63□□□□□ -0.39
SUB1-213ENST00000515355 NCKAP1LP55160 1127 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 ASIC1P78348 528 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 AMPD3Q01432 767 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 SEZ6Q53EL9 994 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 ZC2HC1CQ53FD0 456 aaPredicted RBP12.63□□□□□ -0.39
SUB1-213ENST00000515355 GLRA4Q5JXX5 417 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 RESP18Q5W5W9 173 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 CEP57L1Q8IYX8 460 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 CEP120Q8N960 986 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 MRPS27Q92552 414 aaKnown RBP12.63□□□□□ -0.39
SUB1-213ENST00000515355 PHF12Q96QT6 1004 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 TCF25Q9BQ70 676 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 SCAND2PQ9GZW5 306 aaPredicted RBP12.63□□□□□ -0.39
SUB1-213ENST00000515355 LMAN2LQ9H0V9 348 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 TLR9Q9NR96 1032 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 PANK4Q9NVE7 773 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 KCNH3Q9ULD8 1083 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 TBX20Q9UMR3 447 aa12.63□□□□□ -0.39
SUB1-213ENST00000515355 PRRC2BQ5JSZ5 2229 aaKnown RBP12.63□□□□□ -0.39
SUB1-213ENST00000515355 TRANK1O15050 2925 aa12.62□□□□□ -0.39
SUB1-213ENST00000515355 COL4A6Q14031 1691 aa12.62□□□□□ -0.39
SUB1-213ENST00000515355 GOLGA6L4A6NEF3 574 aa12.62□□□□□ -0.39
SUB1-213ENST00000515355 NRP1O14786 923 aa12.62□□□□□ -0.39
SUB1-213ENST00000515355 PER2O15055 1255 aa12.62□□□□□ -0.39
SUB1-213ENST00000515355 CLDN3O15551 220 aa12.62□□□□□ -0.39
SUB1-213ENST00000515355 B4GALT3O60512 393 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms