RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 MARCH5Q9NX47 278 aa9.45□□□□□ -0.9
TRIM6-211ENST00000515022 TCEAL9Q9UHQ7 104 aa9.45□□□□□ -0.9
TRIM6-211ENST00000515022 GMEB2Q9UKD1 530 aa9.45□□□□□ -0.9
TRIM6-211ENST00000515022 SAMM50Q9Y512 469 aa9.45□□□□□ -0.9
TRIM6-211ENST00000515022 IGLV3-22A0A075B6J6 115 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 CCDC69A6NI79 296 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 SMAPO00193 183 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 SH2B2O14492 632 aaPredicted RBP9.44□□□□□ -0.9
TRIM6-211ENST00000515022 SLC30A4O14863 429 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 GAS2O43903 313 aaKnown RBP9.44□□□□□ -0.9
TRIM6-211ENST00000515022 LILRB5O75023 590 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 SOD2P04179 222 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 ALDH2P05091 517 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 PSAPP07602 524 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 NCLP19338 710 aaKnown RBP9.44□□□□□ -0.9
TRIM6-211ENST00000515022 FSHRP23945 695 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 TARSP26639 723 aaKnown RBP9.44□□□□□ -0.9
TRIM6-211ENST00000515022 SREBF1P36956 1147 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 OR1G1P47890 313 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 PRKCEQ02156 737 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 PRR23BQ6ZRT6 265 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 TMTC3Q6ZXV5 915 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 GRASPQ7Z6J2 395 aaPredicted RBP9.44□□□□□ -0.9
TRIM6-211ENST00000515022 URGCPQ8TCY9 931 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 RABGGTAQ92696 567 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 PHKBQ93100 1093 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 GJA10Q969M2 543 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 FAM193BQ96PV7 902 aaPredicted RBP9.44□□□□□ -0.9
TRIM6-211ENST00000515022 DDX23Q9BUQ8 820 aaKnown RBP9.44□□□□□ -0.9
TRIM6-211ENST00000515022 GCOM2Q9BZD3 368 aaPredicted RBP9.44□□□□□ -0.9
TRIM6-211ENST00000515022 LTB4R2Q9NPC1 389 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 CEP131Q9UPN4 1083 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 PCDHB2Q9Y5E7 798 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 PCDHA10Q9Y5I2 948 aa9.44□□□□□ -0.9
TRIM6-211ENST00000515022 RBM8AQ9Y5S9 174 aaKnown RBP9.44□□□□□ -0.9
TRIM6-211ENST00000515022 TDRD15B5MCY1 1934 aaKnown RBP9.43□□□□□ -0.9
TRIM6-211ENST00000515022 SMCO2A6NFE2 343 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 TGM5O43548 720 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 CHMP2AO43633 222 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 TBC1D4O60343 1298 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 GLUD2P49448 558 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 MTAPQ13126 283 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 MTERF2Q49AM1 385 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 ZNF746Q6NUN9 644 aaPredicted RBP9.43□□□□□ -0.9
TRIM6-211ENST00000515022 TPRG1Q6ZUI0 275 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 CATSPER4Q7RTX7 472 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 MICU3Q86XE3 530 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 ITFG1Q8TB96 612 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 FAM167AQ96KS9 214 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 PRKD2Q9BZL6 878 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 RXFP1Q9HBX9 757 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 CHST12Q9NRB3 414 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 SH2B1Q9NRF2 756 aaPredicted RBP9.43□□□□□ -0.9
TRIM6-211ENST00000515022 NRBP2Q9NSY0 501 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRIM6-211ENST00000515022 SPEGQ15772 3267 aa9.43□□□□□ -0.9
TRIM6-211ENST00000515022 CNTNAP5Q8WYK1 1306 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 C3orf80F5H4A9 247 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 CCL16O15467 120 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 FOSP01100 380 aaPredicted RBP9.42□□□□□ -0.9
TRIM6-211ENST00000515022 CALM1P0DP23 149 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 CALM2P0DP24 149 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 CALM3P0DP25 149 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 SFPQP23246 707 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRIM6-211ENST00000515022 DMWDQ09019 674 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 SRSF5Q13243 272 aaKnown RBP9.42□□□□□ -0.9
TRIM6-211ENST00000515022 KRT32Q14532 448 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 TSGA10IPQ3SY00 556 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 PRR16Q569H4 304 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 ZBTB41Q5SVQ8 909 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 N4BP2L1Q5TBK1 243 aaPredicted RBP9.42□□□□□ -0.9
TRIM6-211ENST00000515022 CREB3L3Q68CJ9 461 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 NIPA1Q7RTP0 329 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 RHPN2Q8IUC4 686 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 FANCBQ8NB91 859 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 NETO1Q8TDF5 533 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 ING5Q8WYH8 240 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 NELL1Q92832 810 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 NLRP4Q96MN2 994 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 TMEM175Q9BSA9 504 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 RSAD1Q9HA92 442 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 FAM217BQ9NTX9 383 aaPredicted RBP9.42□□□□□ -0.9
TRIM6-211ENST00000515022 MIOSQ9NXC5 875 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 SUCLA2Q9P2R7 463 aaPredicted RBP9.42□□□□□ -0.9
TRIM6-211ENST00000515022 CACNG4Q9UBN1 327 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 ANGPTL2Q9UKU9 493 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 CDH7Q9ULB5 785 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 RAB23Q9ULC3 237 aa9.42□□□□□ -0.9
TRIM6-211ENST00000515022 NDRG2Q9UN36 371 aaKnown RBP9.42□□□□□ -0.9
TRIM6-211ENST00000515022 V9GY48 417 aaPredicted RBP9.42□□□□□ -0.9
TRIM6-211ENST00000515022 SLC27A2O14975 620 aa9.41□□□□□ -0.9
TRIM6-211ENST00000515022 ZNF623O75123 536 aa9.41□□□□□ -0.9
TRIM6-211ENST00000515022 HMGB1P09429 215 aaKnown RBP9.41□□□□□ -0.9
TRIM6-211ENST00000515022 SKIP12755 728 aa9.41□□□□□ -0.9
TRIM6-211ENST00000515022 PSMA5P28066 241 aa9.41□□□□□ -0.9
TRIM6-211ENST00000515022 HOXC13P31276 330 aa9.41□□□□□ -0.9
TRIM6-211ENST00000515022 CLK2P49760 499 aaKnown RBP9.41□□□□□ -0.9
TRIM6-211ENST00000515022 DSG1Q02413 1049 aa9.41□□□□□ -0.9
TRIM6-211ENST00000515022 PRKCQQ04759 706 aa9.41□□□□□ -0.9
TRIM6-211ENST00000515022 FZD5Q13467 585 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms