RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GRIK3Q13003 919 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 PRPF4BQ13523 1007 aaKnown RBP11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 MAPK6Q16659 721 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 KRT79Q5XKE5 535 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 DTHD1Q6ZMT9 781 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 DEPTORQ8TB45 409 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 SLC22A17Q8WUG5 538 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 IFT74Q96LB3 600 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 KIFC3Q9BVG8 833 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 APOL5Q9BWW9 433 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 ADAM7Q9H2U9 754 aa11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 PRG3Q9Y2Y8 225 aaPredicted RBP11.55□□□□□ -0.56
HMGXB3-205ENST00000514469 F8W810 466 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 H3BQV1 296 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 SSBP05455 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 URODP06132 367 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 CLCN4P51793 760 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 EFNA5P52803 228 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 HYIQ5T013 277 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 KCNK18Q7Z418 384 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 PPFIBP1Q86W92 1011 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 DAW1Q8N136 415 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 NECTIN4Q96NY8 510 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 KLHL5Q96PQ7 755 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 EMILIN2Q9BXX0 1053 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 MRPL17Q9NRX2 175 aaKnown RBP11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 DAXXQ9UER7 740 aaPredicted RBP11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 PARP2Q9UGN5 583 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 CDH22Q9UJ99 828 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 DNM3Q9UQ16 869 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 SMC3Q9UQE7 1217 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 PHLPP2Q6ZVD8 1323 aa11.54□□□□□ -0.56
HMGXB3-205ENST00000514469 PTGESO14684 152 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 HIP1RO75146 1068 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 NR1I2O75469 434 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 RECQL4O94761 1208 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 CNPP09543 421 aaKnown RBP11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 CDC25AP30304 524 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 GLUD2P49448 558 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 MAPK7Q13164 816 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 NAB2Q15742 525 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 DCAF4L1Q3SXM0 396 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 RARS2Q5T160 578 aaKnown RBP11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 EEF1DP3Q658K8 133 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 ARL6IP4Q66PJ3 421 aaKnown RBP11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 KIAA1841Q6NSI8 718 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 CES5AQ6NT32 575 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 TAS1R1Q7RTX1 841 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 TMEM87AQ8NBN3 555 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 RPGRIP1Q96KN7 1286 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 DRC1Q96MC2 740 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 RPS6KC1Q96S38 1066 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 ADPGKQ9BRR6 497 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 RUSC1Q9BVN2 902 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 POMKQ9H5K3 350 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 SFXN1Q9H9B4 322 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 POLD4Q9HCU8 107 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 SNTG2Q9NY99 539 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 KLK14Q9P0G3 267 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 ARHGAP28Q9P2N2 729 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 USP20Q9Y2K6 914 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 HCN4Q9Y3Q4 1203 aa11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 ARIH1Q9Y4X5 557 aaPredicted RBP11.53□□□□□ -0.56
HMGXB3-205ENST00000514469 VWA3AA6NCI4 1184 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 LIG1P18858 919 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 KLRC2P26717 231 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 MTHFRP42898 656 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 NPTX2P47972 431 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 DSG1Q02413 1049 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 TUSC3Q13454 348 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 CUL4AQ13619 759 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 TMEM132AQ24JP5 1023 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 TMEM119Q4V9L6 283 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 NT5DC1Q5TFE4 455 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 ATF7IP2Q5U623 682 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 KIAA0319Q5VV43 1072 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 RINT1Q6NUQ1 792 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 FUT10Q6P4F1 479 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 C1orf186Q6ZWK4 172 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 CABP7Q86V35 215 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 C12orf76Q8N812 135 aaPredicted RBP11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 EDAQ92838 391 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 FBXL18Q96ME1 805 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 RIPOR3Q96MK2 946 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 PNMA5Q96PV4 448 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 TIPINQ9BVW5 301 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 COLEC11Q9BWP8 271 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 RXFP1Q9HBX9 757 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 CHST7Q9NS84 486 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 ADAM28Q9UKQ2 775 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 SSX2IPQ9Y2D8 614 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 NR2E1Q9Y466 385 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 DENND4AQ7Z401 1863 aa11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 TDRD15B5MCY1 1934 aaKnown RBP11.52□□□□□ -0.57
HMGXB3-205ENST00000514469 C2CD2LO14523 706 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 TEX28O15482 410 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 ADH1AP07327 375 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms