RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	IZUMO2	Q6UXV1	221 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	KCTD1	Q719H9	257 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	IRF2BP2	Q7Z5L9	587 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	MTDH	Q86UE4	582 aa	Known RBP	11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	CADM1	Q9BY67	442 aa	Known RBP	11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	PNPLA7	Q6ZV29	1317 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	FAM187A	A6NFU0	413 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	CCDC160	A6NGH7	325 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	MAGEB3	O15480	346 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	OR6B1	O95007	311 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	RARG	P13631	454 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	PTPN4	P29074	926 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	STRN3	Q13033	797 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	MKRN3	Q13064	507 aa	Known RBP	11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	NFIX	Q14938	502 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	NONO	Q15233	471 aa	Known RBP eCLIP	11.89	□□□□□ -0.51	7e-7	■■■□□ 18.8
PDCD6-210	ENST00000513582	KYNU	Q16719	465 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	PARP10	Q53GL7	1025 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	TNFAIP8L3	Q5GJ75	292 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	MFSD4B	Q5TF39	518 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	PRUNE1	Q86TP1	453 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	SMC1B	Q8NDV3	1235 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	WDR60	Q8WVS4	1066 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	UBN1	Q9NPG3	1134 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	DCTN4	Q9UJW0	460 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	COMMD3-BMI1	R4GMX3	469 aa		11.89	□□□□□ -0.51
PDCD6-210	ENST00000513582	ARFGEF2	Q9Y6D5	1785 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	GFPT2	O94808	682 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	PSMG1	O95456	288 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	BAG2	O95816	211 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	ITGA2B	P08514	1039 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	GALC	P54803	685 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	FKBP3	Q00688	224 aa	Known RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	THOC5	Q13769	683 aa	Known RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	ZCWPW2	Q504Y3	356 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	MFSD5	Q6N075	450 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	CCDC137	Q6PK04	289 aa	Known RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	VPS52	Q8N1B4	723 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	REXO1	Q8N1G1	1221 aa	Known RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	GUF1	Q8N442	669 aa	Known RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	SLC35G2	Q8TBE7	412 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	LENG1	Q96BZ8	264 aa	Predicted RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	MXD3	Q9BW11	206 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	KRT82	Q9NSB4	513 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	PCDHA4	Q9UN74	947 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	ATRN	O75882	1429 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	CFAP69	A5D8W1	941 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	DDX3X	O00571	662 aa	Known RBP eCLIP	11.88	□□□□□ -0.51	5e-13	■■■■□ 26.2
PDCD6-210	ENST00000513582	DCTN3	O75935	186 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	ASL	P04424	464 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	YARS	P54577	528 aa	Known RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	IL9R	Q01113	521 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	ACVR2B	Q13705	512 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	CTTN	Q14247	550 aa	Known RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	RRP1B	Q14684	758 aa	Known RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	CALCRL	Q16602	461 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	LRRC36	Q1X8D7	754 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	EAPP	Q56P03	285 aa	Predicted RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	TTC27	Q6P3X3	843 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	GJB7	Q6PEY0	223 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	ALG3	Q92685	438 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	MRRF	Q96E11	262 aa	Known RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	DDX18	Q9NVP1	670 aa	Known RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	LARS	Q9P2J5	1176 aa	Known RBP	11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	TCEAL9	Q9UHQ7	104 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	ZNF711	Q9Y462	761 aa		11.88	□□□□□ -0.51
PDCD6-210	ENST00000513582	CAMTA1	Q9Y6Y1	1673 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	AP1B1	Q10567	949 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	DHX34	Q14147	1143 aa	Known RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	PDCD7	Q8N8D1	485 aa	Known RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	WDR66	Q8TBY9	1149 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	PWWP2A	Q96N64	755 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	SCAF8	Q9UPN6	1271 aa	Known RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	LRP6	O75581	1613 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	CHD4	Q14839	1912 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	ZNF804B	A4D1E1	1349 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	MROH7	Q68CQ1	1323 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	KIF1A	Q12756	1690 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	SFI1	A8K8P3	1242 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	BTNL10	A8MVZ5	291 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	GYG2	O15488	501 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	TPD52L2	O43399	206 aa	Known RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	EXOC3	O60645	756 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	OR52Z1	P0C646	297 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	VAV1	P15498	845 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	ATP5D	P30049	168 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	BTD	P43251	543 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	CALCOCO2	Q13137	446 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	DPP8	Q6V1X1	898 aa	Predicted RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	SLC30A10	Q6XR72	485 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	FAM196A	Q6ZSG2	479 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	UNC13D	Q70J99	1090 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	MYOCD	Q8IZQ8	938 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	NAT14	Q8WUY8	206 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	GRAMD1A	Q96CP6	724 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	FGFBP2	Q9BYJ0	223 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	GAN	Q9H2C0	597 aa		11.87	□□□□□ -0.51
PDCD6-210	ENST00000513582	TAOK3	Q9H2K8	898 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms