RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 RSPO2Q6UXX9 243 aaPredicted RBP15.57■□□□□ 0.08
SPCS3-204ENST00000513139 SPATA31D4Q6ZUB0 917 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 ZBTB44Q8NCP5 570 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 ATRIPQ8WXE1 791 aa15.57■□□□□ 0.08
SPCS3-204ENST00000513139 NOTCH4Q99466 2003 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 CACNA1GO43497 2377 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 ARL5CA6NH57 179 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 MAP3K13O43283 966 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 ZMYND10O75800 440 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 ITGA4P13612 1032 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 GPC5P78333 572 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 LMNB2Q03252 620 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 PCBP1Q15365 356 aaKnown RBP eCLIP15.56■□□□□ 0.08
SPCS3-204ENST00000513139 TSGA10IPQ3SY00 556 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 Q4G0T1 1027 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 ANO5Q75V66 913 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 MTSS1LQ765P7 747 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 PALB2Q86YC2 1186 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 SMG8Q8ND04 991 aaKnown RBP15.56■□□□□ 0.08
SPCS3-204ENST00000513139 CCDC148Q8NFR7 591 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 NELL1Q92832 810 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 TCEANC2Q96MN5 208 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 SH2D3AQ9BRG2 576 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 COLEC11Q9BWP8 271 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 ANO2Q9NQ90 1003 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 SPATA6Q9NWH7 488 aaPredicted RBP15.56■□□□□ 0.08
SPCS3-204ENST00000513139 PCDHB8Q9UN66 801 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 PPME1Q9Y570 386 aa15.56■□□□□ 0.08
SPCS3-204ENST00000513139 LILRB5O75023 590 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 LRRN2O75325 713 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 MYBP10242 640 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 FSHRP23945 695 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 PSMC5P62195 406 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 PFKPQ01813 784 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 SNW1Q13573 536 aaKnown RBP15.55■□□□□ 0.08
SPCS3-204ENST00000513139 MLF2Q15773 248 aaPredicted RBP15.55■□□□□ 0.08
SPCS3-204ENST00000513139 USP41Q3LFD5 358 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 PRPF31Q8WWY3 499 aaKnown RBP15.55■□□□□ 0.08
SPCS3-204ENST00000513139 SLC7A3Q8WY07 619 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 FGF14Q92915 247 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 MBOAT7Q96N66 472 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 RTKNQ9BST9 563 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 RPP25Q9BUL9 199 aaKnown RBP15.55■□□□□ 0.08
SPCS3-204ENST00000513139 EPC1Q9H2F5 836 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 MINDY3Q9H8M7 445 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 ZSCAN32Q9NX65 697 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 CDV3Q9UKY7 258 aaKnown RBP15.55■□□□□ 0.08
SPCS3-204ENST00000513139 CDH7Q9ULB5 785 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 STK24Q9Y6E0 443 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 F5P12259 2224 aa15.55■□□□□ 0.08
SPCS3-204ENST00000513139 NID2Q14112 1375 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 CYP3A7-CYP3A51PA0A087WV96 503 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 HMGB1P09429 215 aaKnown RBP15.54■□□□□ 0.08
SPCS3-204ENST00000513139 HNRNPA1P09651 372 aaKnown RBP eCLIP15.54■□□□□ 0.08
SPCS3-204ENST00000513139 CYP3A7P24462 503 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 AXLP30530 894 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 CSTF1Q05048 431 aaKnown RBP15.54■□□□□ 0.08
SPCS3-204ENST00000513139 SLC44A4Q53GD3 710 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 BMP2KLQ5H9B9 411 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 PARM1Q6UWI2 310 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 PSPC1Q8WXF1 523 aaKnown RBP15.54■□□□□ 0.08
SPCS3-204ENST00000513139 GJA10Q969M2 543 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 CCDC51Q96ER9 411 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 GAD1Q99259 594 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 NELL2Q99435 816 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 FAM126AQ9BYI3 521 aaPredicted RBP15.54■□□□□ 0.08
SPCS3-204ENST00000513139 C22orf23Q9BZE7 217 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 DHX33Q9H6R0 707 aaKnown RBP15.54■□□□□ 0.08
SPCS3-204ENST00000513139 SMG5Q9UPR3 1016 aaKnown RBP15.54■□□□□ 0.08
SPCS3-204ENST00000513139 IPPQ9Y573 584 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 CNOT1A5YKK6 2376 aaKnown RBP15.54■□□□□ 0.08
SPCS3-204ENST00000513139 ZFHX4Q86UP3 3567 aa15.54■□□□□ 0.08
SPCS3-204ENST00000513139 FAM170BA6NMN3 283 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 ASAP2O43150 1006 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 TBC1D4O60343 1298 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 DKC1O60832 514 aaKnown RBP eCLIP15.53■□□□□ 0.08
SPCS3-204ENST00000513139 SRGAP2CP0DJJ0 459 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 RFC5P40937 340 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 AKAP17AQ02040 695 aaKnown RBP15.53■□□□□ 0.08
SPCS3-204ENST00000513139 LAMTOR4Q0VGL1 99 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 KRT32Q14532 448 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 UBXN2BQ14CS0 331 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 ZBTB41Q5SVQ8 909 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 FUT10Q6P4F1 479 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 SPRYD3Q8NCJ5 442 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 CLDN23Q96B33 292 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 PHF12Q96QT6 1004 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 GPR62Q9BZJ7 368 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 SH3GLB2Q9NR46 395 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 NAP1L2Q9ULW6 460 aaPredicted RBP15.53■□□□□ 0.08
SPCS3-204ENST00000513139 COL4A3Q01955 1670 aa15.53■□□□□ 0.08
SPCS3-204ENST00000513139 ZMYM2Q9UBW7 1377 aa15.52■□□□□ 0.08
SPCS3-204ENST00000513139 F8W810 466 aa15.52■□□□□ 0.08
SPCS3-204ENST00000513139 NCAM2O15394 837 aa15.52■□□□□ 0.08
SPCS3-204ENST00000513139 ERLIN2O94905 339 aa15.52■□□□□ 0.08
SPCS3-204ENST00000513139 TGM1P22735 817 aa15.52■□□□□ 0.08
SPCS3-204ENST00000513139 HOXA9P31269 272 aa15.52■□□□□ 0.08
SPCS3-204ENST00000513139 MLH1P40692 756 aa15.52■□□□□ 0.08
SPCS3-204ENST00000513139 RPS9P46781 194 aaKnown RBP15.52■□□□□ 0.08
SPCS3-204ENST00000513139 QARSP47897 775 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 220 ms