RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 HAS3O00219 553 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 PLEKHA8P1O95397 391 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 WNT11O96014 354 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 F2P00734 622 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 PRNPP04156 253 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 ZNF286BP0CG31 522 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 UBA1P22314 1058 aaKnown RBP7.9□□□□□ -1.14
RFC1-215ENST00000512881 MRPS9P82933 396 aaKnown RBP7.9□□□□□ -1.14
RFC1-215ENST00000512881 ZNF200P98182 395 aaPredicted RBP7.9□□□□□ -1.14
RFC1-215ENST00000512881 GPNMBQ14956 572 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 HSDL1Q3SXM5 330 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.9□□□□□ -1.14
RFC1-215ENST00000512881 USP17L6PQ6QN14 398 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 NXPE4Q6UWF7 544 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 SKAP1Q86WV1 359 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 SRBD1Q8N5C6 995 aaKnown RBP7.9□□□□□ -1.14
RFC1-215ENST00000512881 USP38Q8NB14 1042 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 C3orf58Q8NDZ4 430 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 CAGE1Q8TC20 777 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 PHOSPHO2Q8TCD6 241 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 STK35Q8TDR2 534 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 AFAP1L1Q8TED9 768 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 DHX38Q92620 1227 aaKnown RBP7.9□□□□□ -1.14
RFC1-215ENST00000512881 TMEM87BQ96K49 555 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 KRTAP4-12Q9BQ66 201 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 KATNAL1Q9BW62 490 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 BCAS3Q9H6U6 928 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 MLXIPQ9HAP2 919 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 KRT82Q9NSB4 513 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 RTEL1Q9NZ71 1219 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 CRIM1Q9NZV1 1036 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 SEC63Q9UGP8 760 aaKnown RBP7.9□□□□□ -1.14
RFC1-215ENST00000512881 GTF2IRD1Q9UHL9 959 aa7.9□□□□□ -1.14
RFC1-215ENST00000512881 TTC28Q96AY4 2481 aa7.9□□□□□ -1.15
RFC1-215ENST00000512881 MEIS2O14770 477 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 STAM2O75886 525 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 CALM1P0DP23 149 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 CALM2P0DP24 149 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 CALM3P0DP25 149 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 CKBP12277 381 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 RXRAP19793 462 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 ICAM3P32942 547 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 IRAK1P51617 712 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 NEDD9Q14511 834 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 TRIM71Q2Q1W2 868 aaKnown RBP7.89□□□□□ -1.15
RFC1-215ENST00000512881 GNPTABQ3T906 1256 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 BMP2KLQ5H9B9 411 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 XRRA1Q6P2D8 792 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 LRRC8DQ7L1W4 858 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 ZNF765Q7L2R6 523 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 CENPQQ7L2Z9 268 aaPredicted RBP7.89□□□□□ -1.15
RFC1-215ENST00000512881 CYFIP1Q7L576 1253 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 RAB11FIP4Q86YS3 637 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 FANCBQ8NB91 859 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 SMARCC2Q8TAQ2 1214 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 PPM1EQ8WY54 764 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 CUL5Q93034 780 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 INPP4AQ96PE3 977 aaPredicted RBP7.89□□□□□ -1.15
RFC1-215ENST00000512881 C16orf70Q9BSU1 422 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 LRRC2Q9BYS8 371 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 PSTPIP2Q9H939 334 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 SLC12A7Q9Y666 1083 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 TRANK1O15050 2925 aa7.89□□□□□ -1.15
RFC1-215ENST00000512881 LCTP09848 1927 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 FRMPD4Q14CM0 1322 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 hCG_1642624A0A1W2PR95 340 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 KIF28PB7ZC32 967 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 NOP56O00567 594 aaKnown RBP7.88□□□□□ -1.15
RFC1-215ENST00000512881 FIBPO43427 364 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 NBNO60934 754 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 BAIAP3O94812 1187 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 PARNO95453 639 aaKnown RBP7.88□□□□□ -1.15
RFC1-215ENST00000512881 CXCL10P02778 98 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 CA3P07451 260 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 EXOSC10Q01780 885 aaKnown RBP7.88□□□□□ -1.15
RFC1-215ENST00000512881 ID3Q02535 119 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 RBL2Q08999 1139 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 CCDC85BQ15834 202 aaPredicted RBP7.88□□□□□ -1.15
RFC1-215ENST00000512881 ZNF618Q5T7W0 954 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 PCNX4Q63HM2 1172 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 METTL7BQ6UX53 244 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 SYNE3Q6ZMZ3 975 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 TMTC3Q6ZXV5 915 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 HERC6Q8IVU3 1022 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 SULF2Q8IWU5 870 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 FANCD2OSQ96PS1 177 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 NEK1Q96PY6 1258 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 SLC9A7Q96T83 725 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 GPR20Q99678 358 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 CCDC39Q9UFE4 941 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 LRRC37A2A6NM11 1700 aa7.88□□□□□ -1.15
RFC1-215ENST00000512881 C17orf102A2RUQ5 167 aa7.87□□□□□ -1.15
RFC1-215ENST00000512881 CYP26A1O43174 497 aa7.87□□□□□ -1.15
RFC1-215ENST00000512881 LGALS2P05162 132 aa7.87□□□□□ -1.15
RFC1-215ENST00000512881 SMIM10L2AP0DMW4 78 aa7.87□□□□□ -1.15
RFC1-215ENST00000512881 SMIM10L2BP0DMW5 78 aa7.87□□□□□ -1.15
RFC1-215ENST00000512881 THPOP40225 353 aa7.87□□□□□ -1.15
RFC1-215ENST00000512881 KCNJ6P48051 423 aa7.87□□□□□ -1.15
RFC1-215ENST00000512881 WDR5P61964 334 aaKnown RBP7.87□□□□□ -1.15
RFC1-215ENST00000512881 PLCB3Q01970 1234 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms