RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	EXOSC10	Q01780	885 aa	Known RBP	7.53	□□□□□ -1.2
LINC01088-208	ENST00000511895	ELAVL1	Q15717	326 aa	Known RBP	7.53	□□□□□ -1.2
LINC01088-208	ENST00000511895	FAM214A	Q32MH5	1076 aa		7.53	□□□□□ -1.2
LINC01088-208	ENST00000511895	MFSD5	Q6N075	450 aa		7.53	□□□□□ -1.2
LINC01088-208	ENST00000511895	SSH1	Q8WYL5	1049 aa		7.53	□□□□□ -1.2
LINC01088-208	ENST00000511895	CDK5RAP1	Q96SZ6	601 aa	Known RBP	7.53	□□□□□ -1.2
LINC01088-208	ENST00000511895	ZNF277	Q9NRM2	450 aa	Predicted RBP	7.53	□□□□□ -1.2
LINC01088-208	ENST00000511895	DDX56	Q9NY93	547 aa	Known RBP	7.53	□□□□□ -1.2
LINC01088-208	ENST00000511895	GPRC5D	Q9NZD1	345 aa		7.53	□□□□□ -1.2
LINC01088-208	ENST00000511895	PCDHGA12	O60330	932 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	NDUFS2	O75306	463 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	ZNF20	P17024	532 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	HIBADH	P31937	336 aa	Known RBP	7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	MCAM	P43121	646 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	PRKD1	Q15139	912 aa	Predicted RBP	7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	ELOA2	Q8IYF1	753 aa	Predicted RBP	7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	ANKRD35	Q8N283	1001 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	MDM1	Q8TC05	714 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	GPR20	Q99678	358 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	JAG2	Q9Y219	1238 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	SPEF1	Q9Y4P9	236 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	PCDHGA9	Q9Y5G4	932 aa	Known RBP	7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	PCDHGA8	Q9Y5G5	932 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	PCDHGA7	Q9Y5G6	932 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	PCDHGA6	Q9Y5G7	932 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	PCDHGA3	Q9Y5H0	932 aa		7.52	□□□□□ -1.21
LINC01088-208	ENST00000511895	HOXA3	O43365	443 aa	Predicted RBP	7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	MFAP3L	O75121	409 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	GAST	P01350	101 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	GNAT2	P19087	354 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	PTPN7	P35236	360 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	BUD31	P41223	144 aa	Predicted RBP	7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	APBA1	Q02410	837 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	MST1L	Q2TV78	715 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	GJC2	Q5T442	439 aa	Predicted RBP	7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	EFCAB2	Q5VUJ9	269 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895		Q6ZSN1	163 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	PDZD4	Q76G19	769 aa	Predicted RBP	7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	ZBTB46	Q86UZ6	589 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	GSPT2	Q8IYD1	628 aa	Known RBP	7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	MB21D1	Q8N884	522 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	SAP30BP	Q9UHR5	308 aa	Known RBP	7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	SCOC	Q9UIL1	159 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	HDAC5	Q9UQL6	1122 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	TOP2B	Q02880	1626 aa		7.51	□□□□□ -1.21
LINC01088-208	ENST00000511895	FZD9	O00144	591 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	CYP27B1	O15528	508 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	ADCY6	O43306	1168 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	IPO13	O94829	963 aa	Known RBP	7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	SNUPN	O95149	360 aa	Known RBP	7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	PDGFRB	P09619	1106 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	C5AR1	P21730	350 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	CRHR1	P34998	444 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	PPP3CA	Q08209	521 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	CRHR2	Q13324	411 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	MRPL49	Q13405	166 aa	Known RBP	7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	MAMDC4	Q6UXC1	1216 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	PQLC1	Q8N2U9	271 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	NRG4	Q8WWG1	115 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	EDA	Q92838	391 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	MIEF2	Q96C03	454 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	TEKT5	Q96M29	485 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	ENKD1	Q9H0I2	346 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	TYW1	Q9NV66	732 aa	Known RBP	7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	INTU	Q9ULD6	942 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	DIP2B	Q9P265	1576 aa		7.5	□□□□□ -1.21
LINC01088-208	ENST00000511895	ZMYM3	Q14202	1370 aa		7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	SLC16A1	P53985	500 aa		7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	KIF23	Q02241	960 aa	Predicted RBP	7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	PRAMEF14	Q5SWL7	426 aa		7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895		Q6ZVL8	140 aa		7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	THEMIS	Q8N1K5	641 aa	Predicted RBP	7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	LILRA3	Q8N6C8	439 aa	Predicted RBP	7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	REPS2	Q8NFH8	660 aa		7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	FBXO18	Q8NFZ0	1043 aa		7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	STAG1	Q8WVM7	1258 aa		7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	DPF2	Q92785	391 aa		7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	CPPED1	Q9BRF8	314 aa	Predicted RBP	7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	SLC13A1	Q9BZW2	595 aa		7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	TRPS1	Q9UHF7	1281 aa		7.49	□□□□□ -1.21
LINC01088-208	ENST00000511895	FAM171A2	A8MVW0	826 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	ENDOD1	O94919	500 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	TSPOAP1	O95153	1857 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	ADRB1	P08588	477 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	HSP90B1	P14625	803 aa	Known RBP	7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	KRT85	P78386	507 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	MGAT2	Q10469	447 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	SPTY2D1	Q68D10	685 aa	Predicted RBP	7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	OR7D4	Q8NG98	312 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	ATXN2L	Q8WWM7	1075 aa	Known RBP	7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	ST8SIA2	Q92186	375 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	CHMP4C	Q96CF2	233 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	KRTAP3-1	Q9BYR8	98 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	SENP6	Q9GZR1	1112 aa	Predicted RBP	7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	BCO1	Q9HAY6	547 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	AASDHPPT	Q9NRN7	309 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	TUBD1	Q9UJT1	453 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	GIT1	Q9Y2X7	761 aa		7.48	□□□□□ -1.21
LINC01088-208	ENST00000511895	AQR	O60306	1485 aa	Known RBP eCLIP	7.48	□□□□□ -1.21	6e-6	■■■■□ 25.1
LINC01088-208	ENST00000511895	KRTAP4-8	A0A0G2JLE6	195 aa		7.47	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms