RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 PCDHA6Q9UN73 950 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 IPPQ9Y573 584 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PCDHA8Q9Y5H6 950 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 CFAP99D6REC4 459 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 F5H423 210 aaPredicted RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 SUPT3HO75486 399 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 CYP2E1P05181 493 aaPredicted RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 CYP21A2P08686 494 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 KRT7P08729 469 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 SLCO1A2P46721 670 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 CDC42EP1Q00587 391 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 EN1Q05925 392 aaPredicted RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 SNAPC2Q13487 334 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 GRAMD1BQ3KR37 738 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 MGAT5BQ3V5L5 792 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 TRIM60Q495X7 471 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PODNQ7Z5L7 613 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PASD1Q8IV76 773 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 DDIASQ8IXT1 998 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PIGOQ8TEQ8 1089 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 RAPGEF5Q92565 580 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 ISCA1Q9BUE6 129 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PCDHB7Q9Y5E2 793 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 SLC30A1Q9Y6M5 507 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 GADD45BO75293 160 aaPredicted RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 SFNP31947 248 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 ADD2P35612 726 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PRELPP51888 382 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 EFTUD2Q15029 972 aaKnown RBP eCLIP6.12□□□□□ -1.43
USP38-203ENST00000511739 R3HDM1Q15032 1099 aaKnown RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 IL31Q6EBC2 164 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 NUDCD3Q8IVD9 361 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 BCAS4Q8TDM0 211 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 BTBD6Q96KE9 485 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 ZMAT2Q96NC0 199 aaKnown RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 CAPN10Q9HC96 672 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 GABBR1Q9UBS5 961 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PPP2R2CQ9Y2T4 447 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 FAM32AQ9Y421 112 aaKnown RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 DTNAQ9Y4J8 743 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 CPDO75976 1380 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PFDN1O60925 122 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 OCA2Q04671 838 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 RNF180Q86T96 592 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 ARHGAP18Q8N392 663 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 FBXO18Q8NFZ0 1043 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 SCFD1Q8WVM8 642 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 TTC17Q96AE7 1141 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 KLHL29Q96CT2 875 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PLEKHA8Q96JA3 519 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PBKQ96KB5 322 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PLA2G12BQ9BX93 195 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 UNC45AQ9H3U1 944 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 DHX35Q9H5Z1 703 aaKnown RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 EPB41L5Q9HCM4 733 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 MRPL40Q9NQ50 206 aaKnown RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 LATS2Q9NRM7 1088 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 AKAP7Q9P0M2 348 aaPredicted RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 H2AFY2Q9P0M6 372 aaPredicted RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 FBXL21Q9UKT6 434 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 APOBEC2Q9Y235 224 aaKnown RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 ABCB11O95342 1321 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PRAMEF22A3QJZ6 481 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 RNASEH1O60930 286 aaKnown RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 LMNAP02545 664 aaKnown RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 FDX1P10109 184 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 KRT4P19013 534 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 GCKP35557 465 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 DEUP1Q05D60 604 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 ADCK5Q3MIX3 580 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 LRRC23Q53EV4 343 aaPredicted RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 SPDYAQ5MJ70 313 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 KCTD16Q68DU8 428 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 GPT2Q8TD30 523 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 GLT1D1Q96MS3 346 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 TRIM4Q9C037 500 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 ANAPC7Q9UJX3 599 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 TRIM33Q9UPN9 1127 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 SIGLEC1Q9BZZ2 1709 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 DCDC2CA8MYV0 355 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 RPS6KA5O75582 802 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 LCP1P13796 627 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 TBXAS1P24557 533 aaPredicted RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 OR1G1P47890 313 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 TRPC1P48995 793 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 MTFR1Q15390 333 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 TEDDM1Q5T9Z0 273 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 PPP4R3CPQ6ZMV5 832 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 C11orf96Q7Z7L8 435 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 HIPK4Q8NE63 616 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 TADA1Q96BN2 335 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 ENTPD7Q9NQZ7 604 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 DDX56Q9NY93 547 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 TLR7Q9NYK1 1049 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 PCSK1NQ9UHG2 260 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 ANGPTL2Q9UKU9 493 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 RAB23Q9ULC3 237 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 SPACA6W5XKT8 324 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 EIF4E1BA6NMX2 242 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms