RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 ATG13O75143 517 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 TUBB4AP04350 444 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 FAM163BP0C2L3 166 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 MYL5Q02045 173 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 LRRC32Q14392 662 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 CAVIN1Q6NZI2 390 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 ZC3H14Q6PJT7 736 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 CMTR1Q8N1G2 835 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 TSNARE1Q96NA8 513 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 SELENOOQ9BVL4 669 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 UPF3AQ9H1J1 476 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 PCDHB5Q9Y5E4 795 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 MAFO75444 373 aaPredicted RBP10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 DLATP10515 647 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 ERCC5P28715 1186 aaPredicted RBP10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 DRP2Q13474 957 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 LY6KQ17RY6 165 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 CTXN3Q4LDR2 81 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 SCN4BQ8IWT1 228 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 FBXO44Q9H4M3 255 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 ITGA11Q9UKX5 1188 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 PDXKO00764 312 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 MSH4O15457 936 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 EXTL3O43909 919 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 HIP1RO75146 1068 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 FERP16591 822 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 GEMIN4P57678 1058 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 ASIC2Q16515 512 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 INAVAQ3KP66 663 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 CNGA4Q8IV77 575 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 TTC16Q8NEE8 873 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 RASGRP4Q8TDF6 673 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 RBAKQ9NYW8 714 aaPredicted RBP10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 ANKRD36CQ5JPF3 1778 aa10.41□□□□□ -0.74
POLR2J3-215ENST00000511313 DDX6P26196 483 aaKnown RBP eCLIP10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 EEF1GP26641 437 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 GPS2Q13227 327 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 MUM1L1Q5H9M0 696 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 TMCO4Q5TGY1 634 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 ATL2Q8NHH9 583 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 NAA15Q9BXJ9 866 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 SRRTQ9BXP5 876 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 RRN3Q9NYV6 651 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 TOGARAM1Q9Y4F4 1720 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 FOXD2O60548 495 aaPredicted RBP10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 AVPR1AP37288 418 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 GRIK5Q16478 980 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 TRIM60Q495X7 471 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 CLEC10AQ8IUN9 316 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 TDHQ8IZJ6 230 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 GSDMBQ8TAX9 411 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 PGBD1Q96JS3 809 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 MRPL47Q9HD33 250 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 BRPF3Q9ULD4 1205 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 GDAQ9Y2T3 454 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 PCDHB6Q9Y5E3 794 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 ZC3H11AO75152 810 aaKnown RBP eCLIP10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 PSEN1P49768 467 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 CUL4AQ13619 759 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 ARHGAP29Q52LW3 1261 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 TRIM50Q86XT4 487 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 GANCQ8TET4 914 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 MED15Q96RN5 788 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 PLIN2Q99541 437 aa10.4□□□□□ -0.74
POLR2J3-215ENST00000511313 BCORQ6W2J9 1755 aa10.4□□□□□ -0.75
POLR2J3-215ENST00000511313 SYNRGQ9UMZ2 1314 aa10.4□□□□□ -0.75
POLR2J3-215ENST00000511313 SYN3O14994 580 aa10.4□□□□□ -0.75
POLR2J3-215ENST00000511313 ZNF202O95125 648 aa10.4□□□□□ -0.75
POLR2J3-215ENST00000511313 AFPP02771 609 aaKnown RBP10.4□□□□□ -0.75
POLR2J3-215ENST00000511313 TAP1Q03518 808 aa10.4□□□□□ -0.75
POLR2J3-215ENST00000511313 IL17RBQ9NRM6 502 aa10.4□□□□□ -0.75
POLR2J3-215ENST00000511313 TRIM66O15016 1216 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 KDM1AO60341 852 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 FBXO21O94952 628 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 ZNF286BP0CG31 522 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 SMPD1P17405 629 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 HERC6Q8IVU3 1022 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 SCFD1Q8WVM8 642 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 NELL2Q99435 816 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 WDR35Q9P2L0 1181 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 PCDHB4Q9Y5E5 795 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 CSH1P0DML2 217 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 CSH2P0DML3 217 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 ALADP13716 330 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 PLCG1P19174 1290 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 NR2F2P24468 414 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 KRBA2Q6ZNG9 492 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 CTNNBL1Q8WYA6 563 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 JAKMIP2Q96AA8 810 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 UNC45AQ9H3U1 944 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 TMEM260Q9NX78 707 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 RASAL2Q9UJF2 1139 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 WDR90Q96KV7 1748 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 JAK2O60674 1132 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 CCNE1P24864 410 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 ZNF658Q5TYW1 1059 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 DSG4Q86SJ6 1040 aa10.39□□□□□ -0.75
POLR2J3-215ENST00000511313 TRIB2Q92519 343 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms