RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	AGMO	Q6ZNB7	445 aa		12.18	□□□□□ -0.46
PTCD2-208	ENST00000510676	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.18	□□□□□ -0.46
PTCD2-208	ENST00000510676	TICAM2	Q86XR7	235 aa		12.18	□□□□□ -0.46
PTCD2-208	ENST00000510676	IRF7	Q92985	503 aa		12.18	□□□□□ -0.46
PTCD2-208	ENST00000510676	ZNF302	Q9NR11	478 aa		12.18	□□□□□ -0.46
PTCD2-208	ENST00000510676	DDX19B	Q9UMR2	479 aa		12.18	□□□□□ -0.46
PTCD2-208	ENST00000510676	CEP131	Q9UPN4	1083 aa		12.18	□□□□□ -0.46
PTCD2-208	ENST00000510676	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.18	□□□□□ -0.46
PTCD2-208	ENST00000510676	PIAS3	Q9Y6X2	628 aa		12.18	□□□□□ -0.46
PTCD2-208	ENST00000510676	TEP1	Q99973	2627 aa	Known RBP	12.18	□□□□□ -0.46
PTCD2-208	ENST00000510676	ATM	Q13315	3056 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676		A0A0D9SFI3	127 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	TK2	O00142	265 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	BACH1	O14867	736 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	XYLB	O75191	536 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	TMOD1	P28289	359 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	DSC1	Q08554	894 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	LRRC32	Q14392	662 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	LONRF3	Q496Y0	759 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	WDR44	Q5JSH3	913 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	LARP1B	Q659C4	914 aa	Known RBP	12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	TWF2	Q6IBS0	349 aa	Known RBP	12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	EFCAB12	Q6NXP0	572 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	MRPL10	Q7Z7H8	261 aa	Known RBP	12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	COLGALT2	Q8IYK4	626 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	PGBD4	Q96DM1	585 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	MSANTD3	Q96H12	275 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	FAM227B	Q96M60	508 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	MXRA8	Q9BRK3	442 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	BRD9	Q9H8M2	597 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	LY9	Q9HBG7	655 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	AGO4	Q9HCK5	861 aa	Known RBP	12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	ZNF334	Q9HCZ1	680 aa	Predicted RBP	12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	AVEN	Q9NQS1	362 aa	Predicted RBP	12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	TICRR	Q7Z2Z1	1910 aa		12.17	□□□□□ -0.46
PTCD2-208	ENST00000510676	CNTNAP2	Q9UHC6	1331 aa		12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	ANKRD17	O75179	2603 aa	Known RBP	12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676		H0Y626	953 aa		12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	CDX4	O14627	284 aa	Predicted RBP	12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	ZNF213	O14771	459 aa		12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	CSDE1	O75534	798 aa	Known RBP	12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	TRIM16	O95361	564 aa		12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	HOXC13	P31276	330 aa		12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	FGD1	P98174	961 aa		12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	USP41	Q3LFD5	358 aa		12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	PABPC1L	Q4VXU2	614 aa	Known RBP	12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	C1orf228	Q6PIY5	440 aa		12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676		Q6ZS52	159 aa		12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	FAM193B	Q96PV7	902 aa	Predicted RBP	12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	UBAC1	Q9BSL1	405 aa		12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	TRMT61B	Q9BVS5	477 aa	Known RBP	12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	URB1	O60287	2271 aa	Known RBP	12.16	□□□□□ -0.46
PTCD2-208	ENST00000510676	ARNTL	O00327	626 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	CCL16	O15467	120 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	C8A	P07357	584 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	SCAP	Q12770	1279 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	PLK5	Q496M5	336 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	PPM1L	Q5SGD2	360 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	LIN9	Q5TKA1	542 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	SWSAP1	Q6NVH7	229 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	RTL10	Q7L3V2	364 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	LRRC71	Q8N4P6	559 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	DEFB124	Q8NES8	71 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	ZNF668	Q96K58	619 aa	Predicted RBP	12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	B3GALT6	Q96L58	329 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	DCTPP1	Q9H773	170 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	RSAD1	Q9HA92	442 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	TMEM9B	Q9NQ34	198 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	DNMT3B	Q9UBC3	853 aa	Known RBP	12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	PCDHB2	Q9Y5E7	798 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	PCDHB15	Q9Y5E8	787 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	RAI2	Q9Y5P3	530 aa		12.15	□□□□□ -0.46
PTCD2-208	ENST00000510676	BCLAF3	A2AJT9	711 aa	Known RBP	12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676		F8W810	466 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	MEIS1	O00470	390 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	CAVIN2	O95810	425 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	RPL17	P18621	184 aa	Known RBP	12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	SFPQ	P23246	707 aa	Known RBP eCLIP	12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	CCNE1	P24864	410 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	CDC42EP1	Q00587	391 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	UVSSA	Q2YD98	709 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	CEP55	Q53EZ4	464 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	DGKK	Q5KSL6	1271 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	MIS18BP1	Q6P0N0	1132 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	SYNPO	Q8N3V7	929 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	NLRP7	Q8WX94	980 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	ING5	Q8WYH8	240 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	EVI5L	Q96CN4	794 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	LRIG1	Q96JA1	1093 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	GCOM2	Q9BZD3	368 aa	Predicted RBP	12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	GPR62	Q9BZJ7	368 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	PSTPIP2	Q9H939	334 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	RBM12	Q9NTZ6	932 aa	Known RBP	12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	HCFC1R1	Q9NWW0	138 aa		12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	PIN4	Q9Y237	131 aa	Known RBP	12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	MRPS23	Q9Y3D9	190 aa	Known RBP	12.14	□□□□□ -0.47
PTCD2-208	ENST00000510676	MGA	Q8IWI9	3026 aa		12.13	□□□□□ -0.47
PTCD2-208	ENST00000510676	SPDYE3	A6NKU9	549 aa		12.13	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms