RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 KCNK18Q7Z418 384 aa25.35■■□□□ 1.65
SNF8-209ENST00000510558 GSTCDQ8NEC7 633 aa25.35■■□□□ 1.65
SNF8-209ENST00000510558 PHF7Q9BWX1 381 aaPredicted RBP25.35■■□□□ 1.65
SNF8-209ENST00000510558 KLK14Q9P0G3 267 aa25.35■■□□□ 1.65
SNF8-209ENST00000510558 USP20Q9Y2K6 914 aa25.35■■□□□ 1.65
SNF8-209ENST00000510558 MYH11P35749 1972 aa25.35■■□□□ 1.65
SNF8-209ENST00000510558 GPR37L1O60883 481 aa25.34■■□□□ 1.65
SNF8-209ENST00000510558 EDN1P05305 212 aa25.34■■□□□ 1.65
SNF8-209ENST00000510558 SSBP05455 408 aaKnown RBP eCLIP25.34■■□□□ 1.65
SNF8-209ENST00000510558 EFNA5P52803 228 aa25.34■■□□□ 1.65
SNF8-209ENST00000510558 CUL4AQ13619 759 aa25.34■■□□□ 1.65
SNF8-209ENST00000510558 TPRNQ4KMQ1 711 aa25.34■■□□□ 1.65
SNF8-209ENST00000510558 ARL6IP4Q66PJ3 421 aaKnown RBP25.34■■□□□ 1.65
SNF8-209ENST00000510558 VWA3AA6NCI4 1184 aa25.33■■□□□ 1.65
SNF8-209ENST00000510558 LOC730098B7Z3J9 87 aa25.33■■□□□ 1.65
SNF8-209ENST00000510558 GRIK3Q13003 919 aa25.33■■□□□ 1.65
SNF8-209ENST00000510558 CBX2Q14781 532 aaPredicted RBP25.33■■□□□ 1.65
SNF8-209ENST00000510558 ZRSR1Q15695 479 aaKnown RBP25.33■■□□□ 1.65
SNF8-209ENST00000510558 HYIQ5T013 277 aa25.33■■□□□ 1.65
SNF8-209ENST00000510558 RNF135Q8IUD6 432 aa25.33■■□□□ 1.65
SNF8-209ENST00000510558 RPS6KC1Q96S38 1066 aa25.33■■□□□ 1.65
SNF8-209ENST00000510558 ADPGKQ9BRR6 497 aa25.33■■□□□ 1.65
SNF8-209ENST00000510558 RUSC1Q9BVN2 902 aa25.33■■□□□ 1.65
SNF8-209ENST00000510558 HIP1RO75146 1068 aa25.32■■□□□ 1.64
SNF8-209ENST00000510558 NR1I2O75469 434 aa25.32■■□□□ 1.64
SNF8-209ENST00000510558 SOD2P04179 222 aa25.32■■□□□ 1.64
SNF8-209ENST00000510558 EEF1DP3Q658K8 133 aa25.32■■□□□ 1.64
SNF8-209ENST00000510558 RINT1Q6NUQ1 792 aa25.32■■□□□ 1.64
SNF8-209ENST00000510558 DAW1Q8N136 415 aa25.32■■□□□ 1.64
SNF8-209ENST00000510558 SLC22A17Q8WUG5 538 aa25.32■■□□□ 1.64
SNF8-209ENST00000510558 HERC2P3Q9BVR0 1158 aa25.32■■□□□ 1.64
SNF8-209ENST00000510558 F8W810 466 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 EPCAMP16422 314 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 PEX3P56589 373 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 C1orf186Q6ZWK4 172 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 RPGRIP1Q96KN7 1286 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 PNMA5Q96PV4 448 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 COLEC11Q9BWP8 271 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 EMILIN2Q9BXX0 1053 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 BACH2Q9BYV9 841 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 NT5C3AQ9H0P0 336 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 MRPL17Q9NRX2 175 aaKnown RBP25.31■■□□□ 1.64
SNF8-209ENST00000510558 DZANK1Q9NVP4 752 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 SNTG2Q9NY99 539 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 RAPGEFL1Q9UHV5 662 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 MUTYHQ9UIF7 546 aa25.31■■□□□ 1.64
SNF8-209ENST00000510558 CCDC169A6NNP5 214 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 K7ERI5 159 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 LILRB3O75022 631 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 RECQL4O94761 1208 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 URODP06132 367 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 NPTX2P47972 431 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 ITIH3Q06033 890 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 NT5DC1Q5TFE4 455 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 CES5AQ6NT32 575 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 TAS1R1Q7RTX1 841 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 BRAPQ7Z569 592 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 PPFIBP1Q86W92 1011 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 RNF168Q8IYW5 571 aaPredicted RBP25.3■■□□□ 1.64
SNF8-209ENST00000510558 DRC1Q96MC2 740 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 KLHL5Q96PQ7 755 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 ADAM7Q9H2U9 754 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 CDH22Q9UJ99 828 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 TRIP11Q15643 1979 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 PHLPP2Q6ZVD8 1323 aa25.3■■□□□ 1.64
SNF8-209ENST00000510558 C2CD2LO14523 706 aa25.29■■□□□ 1.64
SNF8-209ENST00000510558 EFEMP2O95967 443 aa25.29■■□□□ 1.64
SNF8-209ENST00000510558 CNPP09543 421 aaKnown RBP25.29■■□□□ 1.64
SNF8-209ENST00000510558 MAPK7Q13164 816 aa25.29■■□□□ 1.64
SNF8-209ENST00000510558 DMP1Q13316 513 aaPredicted RBP25.29■■□□□ 1.64
SNF8-209ENST00000510558 DCAF4L1Q3SXM0 396 aa25.29■■□□□ 1.64
SNF8-209ENST00000510558 HERC4Q5GLZ8 1057 aaPredicted RBP25.29■■□□□ 1.64
SNF8-209ENST00000510558 ATF7IP2Q5U623 682 aa25.29■■□□□ 1.64
SNF8-209ENST00000510558 KCTD17Q8N5Z5 321 aa25.29■■□□□ 1.64
SNF8-209ENST00000510558 CDK5RAP3Q96JB5 506 aa25.29■■□□□ 1.64
SNF8-209ENST00000510558 PLIN2Q99541 437 aa25.29■■□□□ 1.64
SNF8-209ENST00000510558 PLXNA3P51805 1871 aa25.28■■□□□ 1.64
SNF8-209ENST00000510558 GUCY2CP25092 1073 aa25.28■■□□□ 1.64
SNF8-209ENST00000510558 KLRC2P26717 231 aa25.28■■□□□ 1.64
SNF8-209ENST00000510558 RARS2Q5T160 578 aaKnown RBP25.28■■□□□ 1.64
SNF8-209ENST00000510558 C12orf76Q8N812 135 aaPredicted RBP25.28■■□□□ 1.64
SNF8-209ENST00000510558 TIPINQ9BVW5 301 aa25.28■■□□□ 1.64
SNF8-209ENST00000510558 C17orf75Q9HAS0 396 aa25.28■■□□□ 1.64
SNF8-209ENST00000510558 KMT5AQ9NQR1 393 aa25.28■■□□□ 1.64
SNF8-209ENST00000510558 ARHGAP28Q9P2N2 729 aa25.28■■□□□ 1.64
SNF8-209ENST00000510558 DAXXQ9UER7 740 aaPredicted RBP25.28■■□□□ 1.64
SNF8-209ENST00000510558 SSX2IPQ9Y2D8 614 aa25.28■■□□□ 1.64
SNF8-209ENST00000510558 VPS37CA5D8V6 355 aaPredicted RBP25.27■■□□□ 1.64
SNF8-209ENST00000510558 PRR33A8MZF0 331 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 PTGESO14684 152 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 BMP15O95972 392 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 GLUD2P49448 558 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 CLCN4P51793 760 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 TUSC3Q13454 348 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 TMEM119Q4V9L6 283 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 FUT10Q6P4F1 479 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 CABP7Q86V35 215 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 SYT2Q8N9I0 419 aaPredicted RBP25.27■■□□□ 1.64
SNF8-209ENST00000510558 RABGGTAQ92696 567 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 AK8Q96MA6 479 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms