RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ARAP3Q8WWN8 1544 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 RASSF10A6NK89 507 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 AP3M2P53677 418 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 HDAC4P56524 1084 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 TSPY1Q01534 308 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 KCNA1Q09470 495 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 SRLQ86TD4 932 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 ZNF473Q8WTR7 871 aaKnown RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 STAMBPL1Q96FJ0 436 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 IRX2Q9BZI1 471 aaPredicted RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 DHX35Q9H5Z1 703 aaKnown RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 QTRT2Q9H974 415 aaKnown RBP11.22□□□□□ -0.61
NEK1-206ENST00000510533 PNMA3Q9UL41 463 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 HPCAL4Q9UM19 191 aa11.22□□□□□ -0.61
NEK1-206ENST00000510533 CEP170Q5SW79 1584 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 ITIH6Q6UXX5 1313 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 EIF4E1BA6NMX2 242 aaKnown RBP11.21□□□□□ -0.61
NEK1-206ENST00000510533 TMCC1O94876 653 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 PGM1P36871 562 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 CDH6P55285 790 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 HIC1Q14526 733 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
NEK1-206ENST00000510533 SLC18A3Q16572 532 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 C1orf228Q6PIY5 440 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 PDCD6IPQ8WUM4 868 aaKnown RBP11.21□□□□□ -0.61
NEK1-206ENST00000510533 DACH2Q96NX9 599 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 ASPSCR1Q9BZE9 553 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 RBAKQ9NYW8 714 aaPredicted RBP11.21□□□□□ -0.61
NEK1-206ENST00000510533 KIF17Q9P2E2 1029 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 SMG5Q9UPR3 1016 aaKnown RBP11.21□□□□□ -0.61
NEK1-206ENST00000510533 KDM6BO15054 1643 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 CPDO75976 1380 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 PPP1R12AO14974 1030 aaPredicted RBP11.21□□□□□ -0.61
NEK1-206ENST00000510533 SLC16A3O15427 465 aaKnown RBP11.21□□□□□ -0.61
NEK1-206ENST00000510533 CYP27B1O15528 508 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 NPHP4O75161 1426 aaPredicted RBP11.21□□□□□ -0.61
NEK1-206ENST00000510533 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 SERPINB4P48594 390 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 RFX8Q6ZV50 586 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 RASGRP2Q7LDG7 609 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 RHPN2Q8IUC4 686 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 SCN4BQ8IWT1 228 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 CHP1Q99653 195 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 RNF146Q9NTX7 359 aa11.21□□□□□ -0.61
NEK1-206ENST00000510533 E5RI56 91 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 RPS6KA4O75676 772 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 EYA4O95677 639 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 MYL3P08590 195 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 EXOSC10Q01780 885 aaKnown RBP11.21□□□□□ -0.62
NEK1-206ENST00000510533 FASTKD1Q53R41 847 aaKnown RBP11.21□□□□□ -0.62
NEK1-206ENST00000510533 RAPGEF5Q92565 580 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 ARL8AQ96BM9 186 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 NAF1Q96HR8 494 aaKnown RBP11.21□□□□□ -0.62
NEK1-206ENST00000510533 TEX12Q9BXU0 123 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 TRAF3IP3Q9Y228 551 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 SYF2O95926 243 aaKnown RBP11.21□□□□□ -0.62
NEK1-206ENST00000510533 SRGNP10124 158 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 SCP2P22307 547 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 RECQLP46063 649 aaPredicted RBP11.21□□□□□ -0.62
NEK1-206ENST00000510533 PRAMEP78395 509 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 PDIA5Q14554 519 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 SZRD1Q7Z422 152 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 HAUS6Q7Z4H7 955 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 CATSPER1Q8NEC5 780 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 TRIM9Q9C026 710 aa11.21□□□□□ -0.62
NEK1-206ENST00000510533 TDRD3Q9H7E2 651 aaKnown RBP11.21□□□□□ -0.62
NEK1-206ENST00000510533 SARS2Q9NP81 518 aaKnown RBP11.21□□□□□ -0.62
NEK1-206ENST00000510533 FAM217BQ9NTX9 383 aaPredicted RBP11.21□□□□□ -0.62
NEK1-206ENST00000510533 SSU72P8A0A1W2PR75 194 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 FAM196BA6NMK8 535 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 F5H6K3 240 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 APOL1O14791 398 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 EIF3HO15372 352 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEK1-206ENST00000510533 CYP26A1O43174 497 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 GNAT1P11488 350 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 GUCY1A2P33402 732 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 KLRC3Q07444 240 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 LBRQ14739 615 aaKnown RBP11.2□□□□□ -0.62
NEK1-206ENST00000510533 FAM182BQ5T319 152 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 TWF2Q6IBS0 349 aaKnown RBP11.2□□□□□ -0.62
NEK1-206ENST00000510533 LRRC8EQ6NSJ5 796 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 OR9Q1Q8NGQ5 310 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 MS4A14Q96JA4 679 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 CCSER1Q9C0I3 900 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.2□□□□□ -0.62
NEK1-206ENST00000510533 ZNF212Q9UDV6 495 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 PNPLA7Q6ZV29 1317 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 PHF2O75151 1096 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 CHN1P15882 459 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 MXD4Q14582 209 aaPredicted RBP11.2□□□□□ -0.62
NEK1-206ENST00000510533 EPHA7Q15375 998 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 RABGAP1LQ5R372 815 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 STOX1Q6ZVD7 989 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 CCT8L2Q96SF2 557 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 CHCHD3Q9NX63 227 aaKnown RBP11.2□□□□□ -0.62
NEK1-206ENST00000510533 AGO2Q9UKV8 859 aaKnown RBP11.2□□□□□ -0.62
NEK1-206ENST00000510533 DNAJC6O75061 913 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 IL10P22301 178 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 ATICP31939 592 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 CYP2C19P33261 490 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms