RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	PDPK1	O15530	556 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	FLOT1	O75955	427 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	EYA4	O95677	639 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	HLA-DOA	P06340	250 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	CEACAM5	P06731	702 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	LDHC	P07864	332 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	GBP1	P32455	592 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	NKX3-2	P78367	333 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	CALD1	Q05682	793 aa	Known RBP	9.03	□□□□□ -0.96
CAST-231	ENST00000510245	BNIP3	Q12983	259 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	BFSP2	Q13515	415 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	FAM214B	Q7L5A3	538 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	TLK2	Q86UE8	772 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	DCLK2	Q8N568	766 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	TSPYL6	Q8N831	410 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	RIN3	Q8TB24	985 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	PPP1R13L	Q8WUF5	828 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	AP5M1	Q9H0R1	490 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	ABHD16B	Q9H3Z7	469 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	KANSL2	Q9H9L4	492 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	MKNK2	Q9HBH9	465 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	SLC5A6	Q9Y289	635 aa		9.03	□□□□□ -0.96
CAST-231	ENST00000510245	SPTBN2	O15020	2390 aa		9.02	□□□□□ -0.96
CAST-231	ENST00000510245	MYH2	Q9UKX2	1941 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	MYH13	Q9UKX3	1938 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245		C9IYK1	514 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	LINC01565	O15544	149 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	TP53	P04637	393 aa	Predicted RBP	9.02	□□□□□ -0.97
CAST-231	ENST00000510245	COPB2	P35606	906 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	PHKA1	P46020	1223 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	CLCN5	P51795	746 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	TNFAIP2	Q03169	654 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	TMEM132B	Q14DG7	1078 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	IFI16	Q16666	785 aa	Known RBP	9.02	□□□□□ -0.97
CAST-231	ENST00000510245	GNPTAB	Q3T906	1256 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	FAM47C	Q5HY64	1035 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	KIAA1211L	Q6NV74	962 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	LETMD1	Q6P1Q0	360 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	CNKSR3	Q6P9H4	555 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	MAMDC4	Q6UXC1	1216 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	MAPKAPK5	Q8IW41	473 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	UBALD2	Q8IYN6	164 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	SMRP1	Q8NCR6	262 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	9.02	□□□□□ -0.97
CAST-231	ENST00000510245	DDX11	Q96FC9	970 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	SUCLG2	Q96I99	432 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	DNAJC7	Q99615	494 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	CCDC113	Q9H0I3	377 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	ZNF214	Q9UL59	606 aa	Predicted RBP	9.02	□□□□□ -0.97
CAST-231	ENST00000510245	PALD1	Q9ULE6	856 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	TMA7	Q9Y2S6	64 aa	Known RBP	9.02	□□□□□ -0.97
CAST-231	ENST00000510245	USP15	Q9Y4E8	981 aa	Predicted RBP	9.02	□□□□□ -0.97
CAST-231	ENST00000510245	SLC12A7	Q9Y666	1083 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245		R4GN57	208 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	MAST4	O15021	2626 aa		9.02	□□□□□ -0.97
CAST-231	ENST00000510245	ABHD14A-ACY1	A0A1B0GW23	586 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	TLDC2	A0PJX2	215 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	EFCAB14	O75071	495 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	CSPG5	O95196	566 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	RRP1	P56182	461 aa	Known RBP	9.01	□□□□□ -0.97
CAST-231	ENST00000510245	ATP2B3	Q16720	1220 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	ABCB5	Q2M3G0	1257 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	BEND3	Q5T5X7	828 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	ZC3H14	Q6PJT7	736 aa	Known RBP	9.01	□□□□□ -0.97
CAST-231	ENST00000510245	CDH24	Q86UP0	819 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	RIOX2	Q8IUF8	465 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	CCDC105	Q8IYK2	499 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	KREMEN2	Q8NCW0	462 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	DNAJB8	Q8NHS0	232 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	KLHDC4	Q8TBB5	520 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	BCL7C	Q8WUZ0	217 aa	Predicted RBP	9.01	□□□□□ -0.97
CAST-231	ENST00000510245	MSLNL	Q96KJ4	702 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	RTKN	Q9BST9	563 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	CABP5	Q9NP86	173 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	ANGPTL2	Q9UKU9	493 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	PLAGL2	Q9UPG8	496 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	WDR87	Q6ZQQ6	2873 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	FLT1	P17948	1338 aa		9.01	□□□□□ -0.97
CAST-231	ENST00000510245	SLC7A5	Q01650	507 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	RASGRF1	Q13972	1273 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	ZNF574	Q6ZN55	896 aa	Predicted RBP	9	□□□□□ -0.97
CAST-231	ENST00000510245	SPATC1	Q76KD6	591 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	ARMCX2	Q7L311	632 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	STK11IP	Q8N1F8	1099 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	TGFBRAP1	Q8WUH2	860 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	PPP2R3C	Q969Q6	453 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	RUNDC1	Q96C34	613 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	MISP3	Q96FF7	219 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	SUCO	Q9UBS9	1254 aa	Known RBP	9	□□□□□ -0.97
CAST-231	ENST00000510245	SAP30BP	Q9UHR5	308 aa	Known RBP	9	□□□□□ -0.97
CAST-231	ENST00000510245	PFDN2	Q9UHV9	154 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	COL11A1	P12107	1806 aa	Predicted RBP	9	□□□□□ -0.97
CAST-231	ENST00000510245	ASTN1	O14525	1302 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	CDK5RAP2	Q96SN8	1893 aa		9	□□□□□ -0.97
CAST-231	ENST00000510245	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	8.99	□□□□□ -0.97
CAST-231	ENST00000510245	PRR5-ARHGAP8	B1AHC4	643 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	CLEC3A	O75596	197 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	STAT3	P40763	770 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	MCAM	P43121	646 aa		8.99	□□□□□ -0.97
CAST-231	ENST00000510245	IRAK1	P51617	712 aa		8.99	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms